Typha angustifolia (narrow-leaf cattail): 140758157
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Entry
140758157 CDS
T11061
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tang01002
]
140758157
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140758157
04121 Ubiquitin system [BR:
tang04121
]
140758157
Enzymes [BR:
tang01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140758157
Peptidases and inhibitors [BR:
tang01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140758157
Membrane trafficking [BR:
tang04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
140758157
Ubiquitin system [BR:
tang04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140758157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
140758157
NCBI-ProteinID:
XP_072950330
LinkDB
All DBs
Position
3:complement(join(7965672..7965941,7966282..7966623,7966710..7966772,7966905..7967039,7967134..7967265,7967394..7967462,7967784..7968011,7968123..7968223,7968606..7968729,7969377..7969667))
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AA seq
584 aa
AA seq
DB search
MKRRKVANIHNLIHNLKHRLEILSWIQDLPASQYHVVAGILGLGMGIAGLYVALQDGNSN
YIGIPWISERKDPSEIIYYVGGLQNLGNNCFLNVILQGLASCSSFLPFYQNILVADLPFT
VDKIERMPLTVALTSLLEELCITREERIVLNPRNVMFALSMYVSRFKLTRQQDAAESFLH
LLSSLKNEISQSCVPHGSSLAHTSASPSRIYSPKGNKPPQYEQWKHHLLGPCDGTIGSIL
ACRSCSSVLSMDFEHFLCLPLSPVLGGNADIMDGCTLVDCLRYFTAVEHLEYYRCDRCWH
IAALKYLSLKSKEDKEKIDKISHCVNLDSCDCRHLFLPEEIPSNSFSHALKQLSITRCPK
ILCIHLQRALINVHGDFIKHQGHISFPLLLDLFPFTIATTNMGQGTLVESMQQRPSVVTQ
RGQINMQPDMQILPHLFKMMEGDLSAETLTGNNWGKPIDELPGSPVSGTIFGISNNNITH
RSGMFDSNFGCAMDEGQQIGTSSSCHSKSTMYSLCSVVEHYGRYGSGHYAAYRRVKINSN
GIDSMEPLLTADNQWLYVSDREVSHVSEETVLAAEASLLFYERI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagaaaggtagccaatatccataatctcattcacaatcttaagcacaggctt
gagatactatcgtggattcaggatcttcctgcatctcagtatcatgttgtcgctggtatt
cttggtttgggaatgggaattgctggtttgtacgtggcactgcaggatggtaatagtaat
tatattggtatcccgtggatttctgagcgaaaggatccttcagaaatcatatactatgtt
ggaggcctacaaaatcttggaaacaattgctttctaaatgttatcctacagggacttgct
agctgtagcagttttcttcccttttaccagaacattctagttgctgatcttccattcact
gtggacaagattgagagaatgcctcttacagttgctttgacatcattattagaagagcta
tgcattactcgagaagaaagaattgtactaaatccacgaaatgtgatgtttgcattaagc
atgtatgttagccgcttcaagttaacaagacagcaggatgccgcagaatcttttcttcat
ctattatcttccttaaagaatgaaatttcacagtcttgtgttccacatggcagttctcta
gcacatactagtgcaagtccctctaggatatacagtccaaaaggaaacaagccgcctcag
tatgaacaatggaaacatcatcttcttggaccgtgcgatggaactattggaagtatatta
gcttgcagaagttgttcatctgtgctttcaatggactttgagcatttcctttgcttgcct
ctctcacctgtcctggggggaaatgcagatatcatggatggatgtacattggtggattgt
cttagatattttactgctgtagagcatctagagtattaccgctgtgaccgatgttggcat
attgctgctttaaagtatttgtcactaaaatctaaagaagataaggaaaagattgataag
attagtcactgtgtcaatctcgattcttgcgattgcagacatctttttcttccagaggaa
ataccatcaaatagtttttcacatgctctaaagcagttaagtatcactcgctgcccaaag
attttatgcattcatctacaacgtgctttgataaatgtacatggtgacttcatcaagcat
caagggcatatttcctttccattgcttctggacctctttccgtttacgatagccacaaca
aacatgggacagggaacactagtggagagtatgcagcagcgaccatcagtcgtcactcaa
cgaggtcaaataaatatgcaaccggatatgcagattttaccacacctattcaaaatgatg
gaaggagatctttctgctgaaaccttgacaggaaataattggggaaagcccattgatgaa
ttaccgggcagtcctgtttctggaacaatctttgggataagcaacaataatattactcac
agaagtgggatgtttgattctaattttggctgcgccatggatgagggacagcaaattggc
acaagtagttcatgccattccaagagtaccatgtacagcctctgttctgttgttgagcat
tatggccgatatggaagtggacattatgcagcttacaggagagtgaaaatcaactcaaat
ggcatagattcaatggaaccattacttactgcagacaaccagtggctttatgtctcagat
cgtgaagtctcacatgtgtctgaagaaaccgttttggcagcagaagccagtctcctgttc
tatgaacgaatctag
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