Typha angustifolia (narrow-leaf cattail): 140758206
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Entry
140758206 CDS
T11061
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 2
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140758206
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tang01007
]
140758206
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140758206
Enzymes [BR:
tang01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
140758206
Amino acid related enzymes [BR:
tang01007
]
Aminoacyl-tRNA synthetase
Class II (A)
140758206
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
140758206
Prokaryotic type
140758206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
140758206
NCBI-ProteinID:
XP_072950395
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All DBs
Position
3:complement(join(2054039..2054222,2054569..2054627,2054765..2054894,2055041..2055090,2055167..2055352,2056466..2057044,2057453..2057689,2057807..2058199))
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AA seq
605 aa
AA seq
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MEAQNIAQKDDKPVKSFKYSNRVVLKSIVGRADCGLGLVGERVVVGGWVKWGNVKTKPVA
SKKPAAMPVVKDVTCSELLMSKIPLLRRIAKAFAGATETVADEKPDVVVANTASSIVQLR
INDGSCVAKLQVVVDSSICPLEQVTTIGSSVVVEGVIEKVEARGNYIVELKVEKILHVGL
VDHENYPLSKTRLSLDMIRAYPHLRQRTTMVASVVRIRSTLTCAIHMFFQQNGFHFVHTP
IITTTTTEDHKKNFYVTNLFSKSDDNAMKSAMKSPEEINLEVLRAAIKDKSRRIDDLKRT
DSNKEALIASLNDLKMAYELTSQLENQEKSESMNARKVDFSEDFFCRPAYLTSYAGLHLE
SHACALSCVYTFSPIFQAEDSKPMTHLAEMWMLEVELAFAMLEDVMNCAEDCLKSLCRSI
QEDCSADVKFLSSRKHKRCIDRIKSVESHPFARISYTEALEVLKKVTDKVEWGMDLSTEH
QSYLADEYFKRPLIIYEYPKELKPFYARIRDDSRTVSAFDIIVPKAGVIASGSQKEERID
MLDLRIQELGLPREQLDWYLDIHRHGTVEHAGFNVKFEKLIMFVTGIDDIRDVIPFPRTR
GDARC
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccaaaacattgcccagaaagatgataagccagttaagagtttcaagtactcc
aatagggtggtgctgaaatcgattgtcggtcgggcagactgcggcctcgggttggtgggc
gagagggttgtggtaggtggttgggtgaaatggggtaatgtgaagacgaagccagttgca
tctaagaagccagccgccatgccggtggtgaaggatgtgacgtgctcggaacttctcatg
tcgaaaattcccctcctccgacgtatcgccaaggcatttgccggtgcgactgaaactgtg
gcggacgagaagcccgacgtagtggtggctaacaccgcgtcctccattgtgcagctgaga
attaatgatgggtcctgtgttgccaagctccaggtagtggtggactcctccatatgtcca
cttgagcaagttacaaccattgggagctcagttgtagtggaaggtgtgatagagaaggtt
gaggcacgaggcaattatattgtggagcttaaagtggagaaaattttacatgtcggactt
gttgatcatgagaattatcctctgtctaagacaaggttatctttggacatgatcagggct
tatccacacctccgtcaacgtacaactatggtagcatcggttgtccgtatccgcagtacc
ttaacttgtgctatccatatgtttttccaacaaaatggattccactttgtgcatacgccc
attatcacaacaaccactacggaagatcataaaaagaacttttacgttacaaatcttttt
agtaaatcagatgacaatgcaatgaaaagtgcgatgaagagtccagaggaaattaatttg
gaagtattgagggctgctatcaaagataaaagtaggcgaattgacgatttgaagagaact
gatagcaataaggaagcactgattgcttcactaaatgatcttaaaatggcatatgagcta
acatcacagttagaaaaccaagagaaatcagaatcaatgaatgccagaaaggtggatttt
tctgaggatttcttttgccgtccagcttatctaacatcttatgctgggcttcaccttgaa
agccatgcttgtgctcttagctgtgtttacacattcagtccaatatttcaagcggaagat
tctaagccaatgacacatttggcagaaatgtggatgcttgaagttgaactagcttttgcc
atgctagaggatgtaatgaactgtgcagaagattgtttaaaatccctttgtcgctcaatc
caggaagattgttctgctgatgttaagttcttatcaagtcgaaaacacaagagatgtatt
gatcgcatcaagtccgtggagtcacacccttttgcaaggatcagctacacagaagcattg
gaggttcttaaaaaggtcactgacaaagttgagtggggcatggatctgtcaactgaacat
caaagttatttggctgatgaatatttcaaacgaccactcatcatatatgaatacccaaag
gaactcaagccattttatgcacgcataagagatgatagtagaacggtttctgcatttgac
atcattgttccaaaggctggagttatagctagtggaagccaaaaggaggagaggattgat
atgttagatttgaggattcaagagctaggcttgccacgggagcagcttgactggtacctg
gacattcacagacatggcaccgttgaacacgcaggtttcaatgtcaagttcgagaagttg
attatgtttgtcactggcattgatgatatcagggatgtgattccatttcctagaaccaga
ggtgatgcccgatgctag
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