Typha angustifolia (narrow-leaf cattail): 140758320
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Entry
140758320 CDS
T11061
Name
(RefSeq) auxin response factor 23-like isoform X1
KO
K14486
auxin response factor
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140758320
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
140758320
NCBI-ProteinID:
XP_072950531
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All DBs
Position
3:join(417294..417393,417486..417598,417678..417773,417840..417896,418004..418162,418261..418345,418725..418815,418901..419065,419264..419383,419500..419575,419642..419813,419897..420834,421575..421765,421848..422028)
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AA seq
847 aa
AA seq
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MEASSGRSEPIGGGRRAGGEDCSVLGGAPVLGKDGVDALYNELWHACAGPLVTVPRAGER
VFYFPQGHIEQVEASTNQVADQQMPVYDLPWRIPCRVINVQLKAEQDTDEVFAQVTLLPE
SKQDENNMDKEMPPPAPPSRPQVHSFCKTLTASDTSTHGGFSVLKRHADECLPPLDMCQQ
PPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL
RVGVRRAMRQQPNIPSSVISCHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFIIPYD
QYMESVKKNHYIGMRFKMRFEGEEAPEERFTGTIVGIDEADPSRWTGSKWRCLKVRWDET
SSVPHPERVSPWKVEPSVNPTPINSLPVPRPKRPRSNIAPPSPDSSITMREASSKVTVDP
FQHNSLPRVFQGQEMTTLRCNFTDANELDTAQKPIIWSSKFSEDKTNVSSQRWLGPEQQV
QITRHGTSNMEFSGLRAPIYSRDSHGFCSSFLDQNSTDEMSWKTQYQDQESNHIMFSGSR
SLMPPHPLNQQNSKMTAPIGDIPYQKSGIISYGGLGDHDVLQSPRDDQYSNWAAHFLPTF
HTEKTLQHRLVKPQPLVACQREVAKPESSGICKLFGIHLNTRPATSGPSRSSSAPHEPQT
HVRPTAAMQQLQTIEADRCSDLPKLVKSVDISPAGCDVEKPRYPQASNYMQGKPQSVSMR
SCTKVHKQGIALGRSVDLTKFDGYDKLIAELDRMFEFEGELMSPAKNWLVVFTDNEGDMM
LVGDDPWHEFCCMVRKISIYTREEVQRMNPGKLHSTVEDNPAASEEQGVSARETEGSSPK
SFHLESC
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagcagtggacgcagcgagcctatcggaggaggcagaagagccggcggagag
gattgtagtgttctcggtggagctccggttctcgggaaagatggggttgacgcgctctat
aatgagctatggcacgcgtgcgcggggccattggtgacggtgccgcgagcaggggagagg
gtgttctacttcccccagggccatatagagcaggtggaggcttcgacgaatcaggtggcg
gaccagcagatgccggtctatgatctcccgtggagaatcccctgtcgtgtgatcaacgtg
caactgaaggcggagcaggacacggatgaggtgtttgctcaagtgacgttgcttcctgaa
tccaagcaagatgagaataatatggacaaggaaatgccgccccctgcgccgccctcgcga
cctcaagtacactccttttgtaagactttgactgcgtcggacaccagcacgcatggcggg
ttctcggtgttgaaacggcatgcggatgagtgcctccctccgctggatatgtgtcaacaa
cctccgacgcaagagctggttgcaaaggatttgcatggggtcgagtggcgcttccgccat
atttttcggggccaaccaaggaggcatctgcttcagagtggctggagtgtctttgtcagt
tccaaaaggcttgttgctggggatgcttttatatttctaagaggagagaatggcgaacta
cgcgttggagtcaggcgtgcaatgagacaacagccaaatattccatcttcagtcatatca
tgccacagtatgcaccttggtgtccttgcaacagcatggcatgctgttaacacggggacc
atgttcaccgtctactacaaaccaaggacaagcccttctgaattcatcatcccatacgat
caatatatggaatctgtcaagaagaaccattatatagggatgagattcaagatgagattt
gaaggagaagaagctcctgaggagaggttcaccgggacaatagttggcatagatgaagcc
gacccaagcagatggactggatcaaagtggagatgcctcaaggtgagatgggatgaaacc
tcttctgttcctcatccagagagagtttctccttggaaagttgaaccttctgtaaaccct
actcccataaactcccttccagtgcctagaccaaagaggcctcggtcaaacattgctcct
ccctcacctgattcatctattactatgagagaagcttcttctaaagtcactgtagaccct
ttccaacacaatagtcttccaagggtcttccaaggtcaagaaatgacgaccttgagatgc
aattttacagatgctaacgagttggataccgctcaaaagcccattatttggtcttcaaag
ttcagtgaagataaaactaatgtctcttcccagagatggttaggccctgagcaacaggtg
cagataacgaggcatggtacttctaatatggagttctcaggattacgggctcctatctat
tcacgtgattcacatggattttgctcatcctttttggaccagaactcaactgatgagatg
tcttggaagacacaataccaagatcaagaaagcaaccacattatgttttctggctcaagg
tctttaatgcctccacatcctttgaatcagcaaaactcgaagatgaccgccccaattggt
gacataccttatcagaaatctggaattattagttatggtggactgggggatcatgatgtg
ttgcagagcccacgggatgatcaatactcaaactgggctgcacattttctgccaacattt
catacagagaaaaccttgcagcataggttggtcaagcctcaacctctggtagcttgtcag
agggaggttgcaaaaccagaaagtagtgggatatgcaagctatttgggattcatcttaac
accagaccagcaacatctggaccgtcaagatcatcaagtgcgccccatgagccgcagaca
catgttcgtccaacagcagcaatgcaacagttgcaaaccatagaagcagacagatgttca
gatctacccaagttagttaagtccgttgatatttctccagctggctgtgatgtggagaaa
ccgcgttacccccaagcttctaactatatgcagggcaaacctcagagtgtctcaatgcga
agttgtacaaaggtgcataagcagggaattgcccttggcaggtctgtggaccttacaaag
ttcgatggttacgacaaattgattgctgagctggatcggatgtttgagtttgagggtgaa
ttgatgagtcctgccaagaattggctggttgtcttcacagataacgagggtgatatgatg
cttgttggggatgacccctggcacgaattctgctgtatggttcgtaaaatttccatatat
acacgagaggaggtccagaggatgaatccaggtaaactacactccacagttgaagataat
ccagctgcttcagaggaacaaggtgtctctgccagagaaacagaaggcagttcacctaaa
tcctttcatctagagagctgctag
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