KEGG   Typha angustifolia (narrow-leaf cattail): 140758347
Entry
140758347         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K15436  transportin-3
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
tang03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140758347
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    140758347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140758347
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    140758347
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd IBN_N
Other DBs
NCBI-GeneID: 140758347
NCBI-ProteinID: XP_072950575
LinkDB
Position
3:join(13877..14095,14173..14271,14368..14592,14930..15046,15527..15610,15763..15822,20818..20946,21132..21193,21346..21402,22500..22608,25267..25401,28289..28369,32111..32224,32367..32446,32523..32658,36859..37008,39944..40029,41060..41247,41338..41430,46117..46304,46418..46529,48422..48579,51307..51423,55524..55748)
AA seq 1007 aa
MNELQIRVAQAVHVLNHDTQSCNRVAANQWLVQFQQSDAAWEVATSLLTSSDQRHLLSPF
EVEFFAAQILRRKIQNEGYHLQFGAKDALLNALLVAAQRFSLGPPQLLTQICLALSALVL
RAVEHKKPIEQLFASLHQLQSQDNGNLAVLEMLTVLPEEVVEDQSGDRNLDAATRCQFTR
ELLSHTPTVLQFLLLQSEQILDGIQLRERNRKILRCLLSWVRAGCFSEMPPTSLPTHPLL
NFVFNSLQVSSSFDVAIEVMIELVNRYEGLPQVLLFRIQYIKEILLLPALVNKDEKIIAG
LACLMSEIGQAAPALVAEGNSEALVLADAVLRCIAFPSKDWEIADSTLQFWCSLAHYILE
NANKKVVEELFFPVFSSLLDTLLLRAQVDDPDFDGDNGTLDISDGLIHFRMNLEELFIDI
CQLLGSATFVQKLFCGRWASTDSLIPWVEVETRMFALNMVAETVLQDGSSFDFSVVMHLV
TVLTNSTPDKCKGFLAFVYKSVGEVVGSYSKWISSFPSNIRPLLLFCASGITESISSNAC
SSALRKLCEDASAVIHEPQNLEILIWIGEDLEKRDIPLAEEEEIVSAITLTLTSIPDKEL
KKSSLARLLSSSYGAIEKLMVEDREQSLRQSPAAYTQTLNLAVRALYRMGALFGHLANPL
STDQVEDDTILILLGVFWPLLEKLFRSAHMENGSLSAAACRSLSLAIHTSGQHFLILLPK
VLDCLSTNFLLFQSHECYVRAAAIVIEEFGHREEYGSLCISTFERLTSAASVTALNSSYI
CDQEPDLVEAYTSFASTFVRCCPKEVVAASGSLLELSFQKAAICCTAMHRGAALAAMSYM
SCFLEVSLTSVLESLACITEGSLSSVVIHVLSRCGEGLISNVVYALLGVSAMSRVHKSAT
VLQQLAALCSLCERTTWKAVLCWDSLCGWLQSTVQSLPSDYLKQGEGDMIVPLWLKALAS
AASDYLDSKTCGTGRTDHGHMQGQGGRTLKRIVRNFAETHRNVPNPT
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgaatgagctgcagatcagggtggcgcaggcggtgcacgtgctaaaccacgacacccag
tcgtgcaaccgtgtagccgccaatcaatggctagtccagttccagcagtccgacgccgca
tgggaagtcgccacctccctcctcacctcctccgaccaacgccacctcctctccccattt
gaagttgaattcttcgccgcccagatcctccgccgcaagatccaaaacgagggataccac
ctacagttcggagccaaagatgcgttgctcaatgccctcctcgtcgctgctcaaagattc
agcttgggccccccccagcttttgacccagatttgtcttgccctctcggcgctggtgctt
cgggcagtcgagcacaagaagcctatcgagcaactcttcgctagcctccaccagctgcag
agccaggacaacggcaatcttgcagtgctggaaatgctcaccgtccttcccgaggaagtc
gtcgaggaccagagtggagatcgaaatttagacgcagcaaccagatgccagttcacacga
gagctcctctctcatactcctactgttcttcagtttcttctactccaatcagagcaaatt
cttgatggaattcaactccgtgagaggaatcggaagattcttcgatgcttgcttagttgg
gtccgtgcaggttgcttttcagagatgccacccacttcccttccaacacacccacttctt
aactttgtattcaattctttacaggtatcttcctcatttgatgtggccatcgaggttatg
attgagctagtcaaccgatatgagggattacctcaggttttgctgtttagaatacaatat
attaaagaaatacttctccttcctgctctagtaaataaagatgagaagataattgctggt
ctcgcatgcttaatgtctgagattggacaagcagctcctgctttggttgcagaaggaaat
agtgaagcacttgtgcttgcagatgcagttttgaggtgtattgcttttcctagtaaagat
tgggagattgcagattcaactttgcagttttggtgcagtttagcacattatattctggaa
aatgctaataaaaaggttgtggaagaattgtttttccctgtattctcttcattacttgac
acccttttattgcgtgctcaggttgatgatcctgattttgatggtgataatggaacactg
gacatatctgatggactcatacactttagaatgaacttggaggagctttttatagatatc
tgtcagctcttaggatctgctacatttgtacagaagctcttttgtggtagatgggcctct
acagactcactaattccttgggtggaggtggaaactagaatgtttgcacttaatatggtt
gcagagacagttctacaagatggaagctccttcgatttttcagtggttatgcatttggtg
acagttctaacgaatagtacacctgataagtgcaagggttttttggcctttgtttacaaa
tctgttggcgaggttgttggttcttattcaaagtggatatcatcttttccaagtaacata
agaccactacttctattttgtgcgtcagggattacagagtccatatcatcaaatgcttgc
tcatcagcattacgcaaactttgcgaagatgcttctgcagtgatccatgaacctcaaaat
ctggaaatccttatttggattggagaggacttggagaaaagggacataccattagcagaa
gaagaagagattgttagtgctataactctcactcttacttcaattcctgacaaagagcta
aagaagagttcactggcaaggctgctttcttctagttacggagctattgaaaagcttatg
gttgaagatagagagcaatctctaaggcaaagtcctgctgcttatacacaaacgttgaac
cttgctgtcagggctctttacaggatgggagctttatttggtcatctggcaaatcctctg
tcaactgatcaggttgaagatgacacaattcttattcttcttggagtattttggccgctt
cttgagaaacttttcaggtcagcgcacatggagaatggtagtttatctgcagctgcgtgt
cggtctctgtcactggctatacatacctcagggcaacactttctgatactactacctaaa
gttcttgactgcttatctacaaacttcttgttattccaaagccatgagtgctacgtaaga
gcggctgctattgtcattgaagaatttggtcatagagaagaatatggttctctatgtatc
agcacatttgagaggttaacctctgctgcatcagtgacagctctcaattcttcctacata
tgtgatcaagaacctgatttagttgaagcttacactagctttgcttctacatttgttcgc
tgctgtcctaaggaggttgttgctgcatctggctcactacttgagttgtcgttccaaaag
gcagcaatttgctgtacagcaatgcaccgaggggcagctttggcagcaatgtcatatatg
tcctgtttcctagaggtcagcttaacttctgtgctagaatctcttgcttgtataactgaa
ggatcactaagctcagtggtaattcatgttttatcccgctgcggtgaaggactaatatcc
aatgtggtatatgctctacttggtgtatcagctatgtcaagggtgcacaaatctgcaaca
gtattgcagcaattggcagcattatgcagtctttgtgagagaacaacatggaaagcagtt
ctttgttgggattctttatgtggatggctgcagtcaacagttcaatctctgccttcggat
tatctaaagcaaggtgaaggagatatgatagttccattgtggctaaaggcccttgctagt
gcagcctcagattatcttgatagcaagacctgtggtactggtagaactgatcatgggcac
atgcaaggacaaggcggaaggaccctaaagcgtattgttaggaattttgcagagacccat
cggaatgttccaaatcccacatga

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