Typha angustifolia (narrow-leaf cattail): 140758444
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Entry
140758444 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140758444
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140758444
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140758444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
Prok-RING_4
RING_XB3-XBAT31
zf-RING_10
zf-RING_4
zf-Nse
zf-RING_6
Zn_ribbon_6
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
140758444
NCBI-ProteinID:
XP_072950715
LinkDB
All DBs
Position
3:join(1257847..1258128,1258456..1258540,1259432..1259553,1264827..1265081)
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AA seq
247 aa
AA seq
DB search
MSLRTSSSIRCKTRYVMEGGLGEMSSNVDLNDPVVEAGMHKGTSVPENLHLLADVSARQY
SQFLTDDGMRGSPIDVDSIEDDVVILSSSARLSQTSNGAPRRKCPATVLLDDDLEEVHPR
QTGGDVDKTMRTLSCSNHNKRLRIPRSNVATNNEFNEYYRNSKKNKSKNPQPEPVKVSPQ
EPAFSCPVCLNQLDEPCSTICGHIFCQSCIKASIKAQKKCPTCRRKLNKNNFHRVYLPTI
NQQSNSD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcgtacatcgtcatcgattagatgtaagacgagatatgtgatggaaggtggc
cttggagaaatgtcgtcgaatgtggaccttaatgatcctgtggtggaggccggaatgcac
aaaggaacttctgttcctgaaaacttgcacttgttggctgatgttagtgcacgacagtac
tcacagtttctgactgatgatggcatgcgaggatcacctattgatgttgattctattgag
gatgatgtcgtgatcttatcttcatcagctcggctatcccagacaagtaatggggcacct
aggaggaagtgccctgcaacagtgcttctcgatgatgatctggaggaggttcatccaagg
caaacaggtggtgatgtagacaaaacaatgaggactttatcttgtagcaaccataacaag
cgtttgaggattccacgaagcaatgtggctaccaataacgaatttaatgaatattatcgc
aacagcaagaaaaacaaatcaaagaatccacaaccagagcctgtaaaggtgtctccacag
gaaccggcattcagctgccctgtttgcttgaaccagctggacgaaccatgctcgactatc
tgcggccatattttctgtcagagttgtattaaggcttcaattaaagcacaaaagaaatgc
cctacctgtcggaggaaacttaacaagaacaatttccatagagtatatctacctacaata
aatcaacagagtaactcagattga
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integrated database retrieval system
