Typha angustifolia (narrow-leaf cattail): 140758461
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Entry
140758461 CDS
T11061
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140758461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140758461
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140758461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
140758461
NCBI-ProteinID:
XP_072950742
LinkDB
All DBs
Position
3:join(1203698..1204099,1204175..1204228,1204341..1204400,1204480..1204590,1208335..1208400,1208482..1208568,1208649..1208750,1208830..1208979,1209061..1209198)
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AA seq
389 aa
AA seq
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MFGTPSSAPAFGTPSSAPAFGTPSSAPAFGAAPSTPAFGTPSLNPPFGTPSPAPAFGTPS
SAPAFGTPSTPSFSIPSAFPSSSSPSPFFSQQPQQPSPSLGFQPSPSPFANAQITTQMAP
VAPLPLSLADRDIQAILDAYREEPGNPKYAFRHLLFSVTEPSARVKPVGASDIMWAEAMG
KLEGMESSDRERLWPQLVQGFRDLSARLKLQDEVIVSDAERLRMTHANVKMLQRHFQADT
VPWIQRLKQKEQVIQRRLLRIMRIVEALEGKGFRMPLTKDEVELSEKLDAIARRIKGPGA
ELSKRVYNLLSISRVLANSNGSGGPIYVHGSTKIQEQSLAELQEVLQQQTEAIARLGNVL
KRDTRDMEIIMSENSDMLEDGGGRRTLKN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcaccccttcttcggcgccggctttcggcaccccttcttcggcgccggctttc
ggcaccccttcttcggcgccggcattcggggcagccccttcgacgccggctttcggaact
ccttctctgaatccaccttttggtaccccttccccggcgccggctttcggaaccccctcc
tcggcgccggcttttggaacaccttcgactccatctttctccatcccctccgcttttccc
tcatcctcctccccttcccctttcttctcccagcaaccgcaacaaccatccccttcatta
gggtttcagccttctccttccccatttgccaatgcccagatcactacccagatggccccg
gttgcgcctctcccgctctccctcgccgatcgcgacatccaggcgatcttggacgcttac
agggaggaaccagggaaccccaaatacgcgttccggcatttgttgttcagtgtgacggag
ccctcggcgagggtgaaacctgttggtgcatcggatattatgtgggcggaggcgatgggg
aagctcgagggaatggagagttcggatcgggagaggctgtggccgcagcttgttcagggg
tttagagatttgtctgcgcgccttaagcttcaagatgaggtcattgtttcagatgctgaa
aggttacggatgacccatgctaatgtcaaaatgcttcaaaggcatttccaagcagatact
gttccatggattcaaaggttaaagcaaaaagagcaggttatccaacggcgtcttctgagg
atcatgagaatagtggaggcactggaaggcaagggttttcgcatgccattgaccaaggac
gaagttgagttgtctgaaaaattggatgctatagcaagacggataaaaggacctggtgca
gaattgtccaagcgagtttataatcttctgtcaatatctcgtgttcttgctaatagcaat
ggttcaggtggtcctatctatgttcatggttctaccaagattcaagagcaaagccttgct
gaactacaggaggtcctccaacagcagactgaagcaattgccaggttgggtaatgtactc
aagagggataccagggacatggaaatcattatgtctgagaattcagatatgctagaagat
ggaggtggaaggcggactttgaagaactaa
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