KEGG   Typha angustifolia (narrow-leaf cattail): 140758728
Entry
140758728         CDS       T11061                                 
Name
(RefSeq) sister chromatid cohesion protein SCC2
  KO
K06672  cohesin loading factor subunit SCC2
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tang03036]
    140758728
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    140758728
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 Cnd1 PHD_2 PHD MRNIP zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 140758728
NCBI-ProteinID: XP_072951098
LinkDB
Position
4:join(223757..223992,224085..224194,225711..225847,225926..226025,226125..226375,226759..226866,226995..227106,228394..228490,228582..228768,228846..229280,229445..229968,230039..230246,230350..230400,230491..230649,230724..230891,231041..231340,231420..231572,231970..232139,232923..233031,233339..233500,233580..233684,233752..233979,234080..234213,234297..234563,234642..234936,235240..235332,235445..235570,235771..236010)
AA seq 1754 aa
MEFNQGIGYEKACRLSNTTHSEIAPALSLPSLPVCFGSPDHKIELSDEPGGARFADRPEI
LAHAGTIAELLRNCDVSYLNLKEKAGTAPNDPRECSRLYQEVLKYNPEAFTCYYRGSLQE
QSSRNQVPEKKPFEQIVTNAVHVQRGQEGSLDDNLQRNMVHNQPTYAISKKPKVRKKESD
TVPLTSGSDAPGHQDIIMNFCEIIEDFCGRAEIADDVEGAEGSSLHMADLKFFVNEITSA
RSKKVLHLIPLDTLTRLTNVLDRQIQCAQGLSIENNENPDTDTEASILCALESIHAMLAI
MTHQDMPKQLYREEIIERILDFSRHQIMECVAACNPFYRNLQKPNEIGANDGDEDEEDET
NNASIGKKRRNTRSVNTRKSAGNKVSAAVYTVGQKLCLILGFLRELLSVVRLSDSCILQL
VKTSFSTFLVDNIQLLQLKSIDLICGVFASYTQHRSFLIDETIQLLRKLQFSKRALRTYH
LPDEEQKQIQMITALLVQLVQFSAVLPDSLRTTVNWNSILDASIDAGYPIKCHEAATEVC
CLFWTSVLQRFTTTAKTQDVFEPKAVLENLVMDLLMTLNLPEYPASAPILEVLCVLLLQN
AGLKSKDISARCLAIELLGTVAARLKRDSVVCSRDKFWILQELAGASVDTSDGLKDACSI
CLNGRGVNIVCHACGRCFHSDCMGVGQETLLRDWSCHICFCRKQLSVLQSYNKLQGKDNG
KRNADLPTNRSETSDSITRLEVVQQILLNYLQEAGSQDDGNLFTRWFHLCLWYKDDPLSQ
EKIIYYLARLKSKEILRDSGSSSLLSRDWAKKICLALGQKNSFSRGFDKILSLLLASLRE
NSPIIRAKALRAVSGIVEADPEVLCDKRVQCAVEGRFCDSAISVREAALELVGRHIASHP
DVGLKYFEKVAERIKDTGVSVRKRAIKIIRDLCTSNPNFSERTHAFIEIISRVNDEESSV
QDLVCKTFYEFWFEESTGSNKHYVADGSSVPMEVATKTEQIVDMLRKMPNHHLLVTIIKR
NLALDFLPQSAKATGVNAASLASVRRRCELICKRLLERILQVEEGTSDEEEVRALPYVLA
LHAFCVVAPTLCAPATDPSQFVVTLQPYLKNQVDNKSIAQLLESIVFVIDAVLPLLRKPP
QSLIAELEQDLKYMIVRHSFLTVVHACIKCLCSLSKIAGKGASLVEYLVQIFFKHLLGPS
VDNKQLLGRSLFCLGLLLRYGNELIVTGDNQHLHIVKSLSLLKKYLLMEDFGLKVRALQA
LGYVLIAKPEYMLEKDILKLVEASLSSGVDYRLKMQALQNLYEYLADAESQLSDSASKPP
SQYAEDGGKVPVAAGAGDTNMCGGIIQLYWDCILERCLDVNDQVRQSALKIVEIVLRQGL
VHPITCVPHLIALETDPLEVNSKLAHHLLMNMNEKYPSFFESRLGDGLQMSFRFFESIVS
NHDMVSGTMKGKPDGNPIAFVRPGISRIYRLIRANRVSRNKFVHSIVRKFESDSWNNSSV
SFLVYCTEVLASLPFTCPDEPLYLIYDINRVIQLRAGALEANMKLWSSFLLQRDPAKISS
DSLYLTTQSGSHHSDNQNMIGNPEMSPDKICSISEEGVQKFQADCQEAIALQLLLRLKRH
LKIVYSLNDARCQAFSLKEQPKSGETLSKQNISFNISDTSISMPTCYQDMIQKYQEFKTL
LREDAMDYVAYTATVKRKQPTPRNSRRGKSALAKGEDGDEDEANDEDWSGGPRRLDFSGQ
RSNGGRVTRQRVQV
NT seq 5265 nt   +upstreamnt  +downstreamnt
atggagttcaaccagggtatcgggtacgagaaggcgtgccgcctctcgaacacgacgcat
tcggagatcgctcccgccctatcccttccttctcttcctgtttgctttggctccccggat
cacaagatcgagctctctgacgagcccggcggtgcgcgttttgctgataggccggagatt
cttgcgcacgcgggaacaattgcggagctgctcaggaactgcgatgttagctatcttaat
ctgaaggagaaggccggaactgctccaaatgacccgagggagtgttcgaggctttatcaa
gaagtgctcaagtacaacccggaagcattcacttgctactatcgaggttcacttcaggag
cagagctctcgtaatcaagtaccagagaagaaaccctttgagcaaattgtaactaatgct
gttcatgtacaaaggggacaggaaggttctcttgacgacaatttgcaaagaaatatggtt
cataaccaacctacatatgctatttcaaagaaaccaaaagtcagaaaaaaggaaagtgat
actgtgcctctaacctcaggttcagatgcccctggtcatcaagatatcatcatgaacttc
tgtgagataattgaagacttctgtggaagagcagagattgctgatgacgtagaaggtgcc
gaggggtcatctcttcatatggctgatttgaaattttttgtaaatgaaattacatctgct
cgctcaaagaaggtcttgcacttgattcctcttgatactcttacgaggctcacaaatgtt
ctagatcggcagatccagtgtgcacaaggtttatccattgaaaataatgagaatcctgat
acagatactgaggcatcgattctctgtgcattggaatccatacatgcaatgttggcaatt
atgactcaccaagatatgccaaagcaactttatcgagaagaaattatcgagcgaattctt
gatttctcaagacatcagatcatggaatgcgttgctgcatgtaacccattctaccgtaat
ctgcaaaaaccaaatgaaattggtgcaaatgatggcgatgaggatgaagaggatgaaact
aataatgcttcaataggcaaaaagcggcgcaacactcgtagtgttaatacaaggaagtct
gctgggaataaggtttctgcagctgtttatactgtgggacagaagctttgtttgatttta
gggtttttaagagaacttctctcagtagtacgcctttcagatagttgcattcttcagtta
gtgaaaacaagcttttcaactttcttggtggataacatacagcttttacagttgaagtct
atcgatttaatttgtggggtgtttgcttcatacacacagcacaggagcttcttaatagat
gaaacaatccagcttcttcgtaagttgcagttttcaaaacgtgcccttagaacttaccat
cttcctgatgaagaacaaaagcagattcagatgataacagctttattggttcagttggtt
caatttagtgcagttcttcctgacagtttacgaacaacagttaattggaattccatttta
gatgcctcaatagatgcaggttatccaattaagtgtcatgaagcagcaactgaggtgtgc
tgccttttttggactagtgttcttcagcgtttcactactactgctaaaactcaggatgtt
tttgagcccaaagcggttttagagaatcttgtgatggatttgctgatgacattgaacttg
cctgaatatcctgcttctgctcctatactcgaggttctttgtgttttgctactccaaaat
gctgggttgaaatctaaggacatctcagctcgttgcttagctattgagcttcttgggact
gttgcagcaaggctgaaacgtgattctgtagtttgcagcagggataagttttggatcttg
caagagctagctggtgcaagtgttgacacttctgatggcttgaaagatgcttgttctatc
tgtcttaatgggagaggtgtaaatatagtttgtcatgcttgtggcagatgcttccattca
gattgcatgggagttggacaggaaaccttgcttcgtgactggtcttgtcatatatgcttt
tgcagaaagcaactcagtgttttacaatcatataacaagttacagggtaaagacaatggt
aaaagaaacgcagacttacccaccaacaggtctgaaacttctgactccattacaagattg
gaagttgttcagcaaattctcttgaattatctgcaggaagctggctctcaagatgatggg
aatctgtttacgcgatggttccatctttgcctatggtataaggatgatcctctatctcag
gagaaaataatctactatcttgctagattaaaatcaaaggagattttgcgagattctggt
agcagttcacttttgtcaagagattgggctaagaaaatttgcttagcattggggcaaaag
aactccttctctagaggatttgataagatactttccctacttctggcaagcttgagggaa
aactctccaataataagagccaaggccttacgtgctgttagtggtatagttgaagctgac
cctgaggtgctgtgcgacaaacgtgtccaatgcgctgtcgaaggaaggttttgtgattct
gcaatttcagttcgtgaagctgctcttgaacttgttggtaggcatattgcctctcaccct
gatgttggtttgaagtactttgaaaaggttgctgagaggataaaggacacgggagtgagt
gtacgcaaacgtgccattaagattatccgtgatctttgtacttccaatcctaatttttca
gagagaacacatgcttttatcgagataatttctcgtgttaacgatgaagagtctagtgtc
caggatcttgtatgcaaaacattttatgagttctggtttgaagaatccactggaagtaat
aagcactatgttgctgatggtagttctgtgcctatggaagtggcgactaagactgagcag
attgttgatatgttgaggaagatgcctaaccatcatctgcttgtgacaatcataaaacgc
aatttagcacttgattttctcccacaatcagctaaagctactggagtgaatgcagcttct
ctggcatctgtacgtaggcgttgtgaattgatttgtaagcgcttattggaaagaatattg
caggttgaagagggaactagtgatgaagaagaagtccgtgcacttccttacgtgcttgca
ctgcatgcattttgtgttgttgcaccaacactatgtgcaccagcaactgatccctcccaa
tttgtggtgacacttcagccataccttaagaatcaggttgacaacaaatcaattgctcag
ttgcttgaaagtatagtatttgtaattgatgctgttctccccctacttcggaagccacca
caaagtctcattgcagaactggaacaggatctgaaatacatgatagttcggcattctttc
ctgacagttgtgcatgcttgtatcaagtgtctctgttcgcttagtaaaatagctggcaaa
ggtgcaagtttagtggagtacctagttcagattttcttcaaacatcttcttggtcccagt
gttgacaataaacagctattagggcgctctctattctgtctggggctgctccttaggtat
ggcaatgaactaattgtcacaggtgacaatcaacatctccatattgttaagagtctctca
ttgcttaagaagtaccttcttatggaggatttcggcttaaaagtccgagctttgcaggca
ttaggttatgttttgattgctaagcctgagtatatgttggagaaggatattctaaaactg
gtggaggcatcactttcttctggtgttgattatcgattaaagatgcaagcattgcaaaac
ctttatgagtatcttgctgatgcggaaagccaactctcagattctgccagtaagcctcct
agtcagtatgcagaagatggtggaaaagtacctgtggctgcgggtgctggtgatactaac
atgtgtgggggaatcattcagttatattgggattgtattcttgaaagatgcttggatgta
aatgatcaagttcgtcagtctgctctcaagattgtggaaattgttctccgccaaggtcta
gttcatccaattacttgtgttccacaccttatagcactcgaaactgatccgctggaagtg
aactcaaagctggcccatcatttgctcatgaacatgaatgaaaaatacccttcctttttt
gaaagccgtttaggtgatggcttacagatgtctttcagattttttgagtccatagtgagc
aatcatgatatggtatcaggaactatgaaaggaaaaccagatggcaatcccattgcattt
gttaggccagggatatcccgaatatataggcttattcgagcaaatcgtgtctcaaggaac
aaatttgtgcactcaatagttcgtaaatttgagtctgatagctggaataattcctcggtc
agctttcttgtgtattgtacagaagttcttgcatctctccctttcacatgtcctgatgaa
cctctttacctgatttatgatataaatcgggttattcaattaagagctggggcacttgag
gccaatatgaaactgtggagttccttcttgctacagcgggacccagcaaagatttctagt
gatagtctttatcttacaacccaatcaggatcacatcattcagataatcaaaacatgata
gggaatcccgaaatgagtcctgacaagatatgtagtatatcagaagaaggcgtgcaaaag
tttcaggccgattgtcaggaggctatagctttgcaacttcttttgagactgaagaggcat
ttgaaaattgtgtacagtctaaatgatgcccgctgtcaggcattttctttgaaggaacag
ccaaagtctggtgagactctctctaagcagaacatttcattcaacatcagtgacacttct
atcagtatgcccacctgctaccaagatatgatacaaaaataccaggagttcaagacattg
ctgagggaagatgccatggattatgttgcctatacagctacagtcaagaggaaacagccg
actcctaggaattccaggcgtggaaaatctgctctagcgaaaggcgaggatggtgatgaa
gatgaagccaacgacgaagactggtcagggggcccgagaaggctcgactttagtggacaa
aggagcaacggtggcagggtgaccagacaacgggtgcaagtatga

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