Typha angustifolia (narrow-leaf cattail): 140758730
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Entry
140758730 CDS
T11061
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140758730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140758730
Membrane trafficking [BR:
tang04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
140758730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Mon2_C
Motif
Other DBs
NCBI-GeneID:
140758730
NCBI-ProteinID:
XP_072951100
LinkDB
All DBs
Position
4:complement(join(4467752..4471321,4471465..4472217))
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AA seq
1440 aa
AA seq
DB search
MGRPRLQNSTINPIEEESSDSPESPGVSSPPAEHAALACVINSEVSSVLAVMRRNVRWGS
GRYGSSSAADDHHLEHPLVQNLKFLRRRLFSSGPASSLDPSGYLRPFLDVVRSDETGAPI
TSIALSSVYKILTLDAALAAPGMGSAMQEVVDAVTSCRFEVTDAASEETVLMKILQVLLA
CMRSRAATAALGNEHVCTIVNTCFRVVHQAGTKGELLQKFSRYTMHELVRCVFLHLPDVG
DGPEQPYIKPQIGGVDKDQAFGIKQEENGNGSFGSGTGAIDDNVSNLEASNGGGVLVEPY
GIPCMVEIFHFLCSLLNFVEQTGMNPNTNAVAFDEDVPLFALGLINTAIELGGASIRKHP
KLLALIQDELFRNLMQFGLSMNPLILSVVCSIVLNLYHHLRTELKLQLEAFFSCVILRLA
QTRYGASYHQQEVAMEALVDFCRQKTFMAEMYANLDCDITCSNIFEELANLLSKSAFPVN
CPLSSMHVLALDGLIAVIQGMANRIGNAPQRSEQEAVDLEEYIPFWAVKCENYSDPDHWV
KFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPEKLDPQSVACFFRYTAGLDKNL
VGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIQRVLEAFSER
YYEQSPKILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREF
LSELYHSICRNEIRTIPDQGIGFFEMSPSRWIDLMRKSKSTSPYIVCDLRPFLDHDMFAI
MSGPTIAAIAVVFDYAEHEEVLLTCVDGFLAVAKISAFHHLEDVLDDLVVSLCKFTTLLN
TSLVEEPVTAFGDDMKARLATETLFNIANRYGDFIRTGWRNILDCILRLHKLGLLPARVA
SDAADDSELPSETVQGKPAPNSLSTSHIPAIGTPRRSSGLMGRFSQLLSLDTEEPRSQPT
EQQLAAHQRTLQTIQKCHIDSIFTESKFLQADSLLQLARALIWAAGRPQKVTNSPDDEDT
AVFCLELLIAITLNNRDRIVILWQGVYEHIANIVQSTVMPCALVEKAVFGLLRICQRLLP
YKENLADELLRSLQLVLKLDARVADAYCENITQEVTRLVKANATHIKSQMGWRTIMSLLS
ITARHPEASEVGFEALVFIMSDGVHLSPANYVLCIEASRQFAESRVGLTDRSVRAMDFMA
ESVNCLVRWSKESKEAGEEAEKISEGIREMWLRLLQALRKVCLDQREEVRNQALSSLQRC
LVGSEGISLMPTSWLQAFDHVIFAMLDDLLEIAQNHSQKDYRNMEGSLLLAMKLLAKIHL
QLLPELFGLSSFCKFWLGVLSRMEKYMKVKVRGKRSEKLQELIPELLKNTLLVMKARGIL
AKRSTIGGDSLWELTWLHVNNISTSLQSEVFQGQESDLGSSIQPDGAGSGPPGEVSGDQT
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacggctgcagaattccaccataaaccccatcgaggaggagtcctcggac
tctccggagagccccggggtatcgtcccctcctgccgagcacgccgccttggcctgcgtc
atcaactccgaggtcagctccgtcctcgccgtgatgcgacgcaacgtgcggtggggcagc
ggccgctacggctcctcctccgccgccgacgaccaccacctcgagcatccccttgtccag
aacctcaagttcctccgccgtcgcctcttctcgtccggcccggcgagctccctcgaccca
tcaggctacctccgcccgttcttagacgtcgtccggtccgacgagaccggcgcgcccatc
accagcatcgcgctgtcctcggtctacaagatcttgactttggacgccgcgctggccgcc
cccgggatgggctctgcaatgcaggaggtggtcgacgccgtgacgagctgccggttcgag
gtgacggatgcggcgtccgaggagacggtcctaatgaagatcctgcaggtcctcctcgcc
tgcatgcggagccgcgcggccaccgccgccctcggcaacgagcacgtgtgcacgatcgtc
aacacgtgcttccgcgtcgtgcaccaggccgggaccaagggggagctcctgcagaagttc
tcgcggtatacgatgcacgagctcgtccgctgcgtcttcttgcatttgcccgatgtcggt
gatgggccggagcagccttacatcaaaccgcagattggtggtgttgacaaggatcaggct
tttgggataaagcaagaggaaaatggaaatggaagttttgggtctgggacaggtgccatc
gatgataatgtaagcaatttggaagcttcaaatggtgggggggtcttggtggagccttat
gggattccttgcatggttgagatatttcattttttatgttctcttctgaattttgttgag
caaactgggatgaatcctaacaccaatgcagtggcttttgatgaagatgtgccattattt
gctcttgggttgatcaatactgctattgaattagggggagcttcgattaggaagcacccg
aaattgttggctttgatacaggatgagctcttccggaatctgatgcagtttggcttgtca
atgaacccgctgattctttcggtggtatgcagcattgtcttgaatctttatcatcacttg
cgaacagagctcaaattgcagcttgaggcgttcttctcgtgtgtgatattgaggctagca
caaacacggtatggggcaagctaccatcagcaggaagttgctatggaggctcttgtggac
ttctgtcggcagaagacttttatggcagaaatgtatgccaatctggactgcgacataact
tgcagcaatatatttgaagagcttgccaaccttctttcaaaaagtgcatttcccgtaaat
tgccctttatcttctatgcatgttctagccctggatggtttgattgcagtaattcagggg
atggctaacagaataggtaatgcgcctcaacgttcagaacaagaagcagtggatcttgag
gaatatattcccttttgggcagtcaagtgtgagaattattctgatcctgaccattgggtt
aagtttgttcgacgaagaaagtatatcaagaggaggctgatgataggtgctgatcatttc
aatagggatccaaagaagggattggaatttcttcaagggacccatctcttgccggagaag
cttgacccgcagagtgttgcttgttttttcagatatacagctggtttggataagaatctt
gttggggatttcttgggtaatcatgacgagttttgtgttcaggtgcttcatgaatttgct
gggacttttgattttcaggacatgaatctggatactgctctgaggctctttttggagacc
ttccggctgccaggtgagtcacagaaaatacagagggttctcgaggctttttcagagaga
tactatgaacagtctccaaagattcttgccaacaaggatgctgctcttctgttatcgtac
tcacttataatgctgaacacagatcaacataatgtgcaggtgaaaaagaagatgactgaa
gaggacttcattagaaataaccgccacattaatggaggcaatgacctcccacgagaattc
ctgtctgagctctatcactcaatctgtaggaatgagataagaaccattcctgaccagggt
attggtttctttgagatgtctcccagtcgttggatagatttaatgcggaagtcaaaatcg
acatctccgtatattgtctgtgatttgaggcctttccttgaccatgatatgtttgcaatc
atgtcaggtcccacaattgctgccattgcagtggtatttgattatgctgaacatgaagaa
gtcctgctaacttgtgtagatggcttcttggctgtggcaaagatctctgctttccatcat
ctagaagatgttttggatgatctagttgtttctctttgtaaattcacaaccctattgaac
acatcattggttgaggaaccagttacagcctttggggatgatatgaaggctaggttggca
actgaaacattgttcaacatagctaacagatatggtgatttcatacgcactggctggagg
aatatattggactgtatcttaaggctgcacaagctaggtctgcttcctgcccgtgttgct
agcgatgcagctgatgattcagaactgccttcagaaacagtccaagggaaacccgctcct
aattctctttccacatctcacattcctgcgattggtactcctcgcagatcctctggcctt
atgggaaggtttagccaactattatcacttgacacagaagaaccaagatcacaaccaact
gagcagcaacttgctgcgcaccaaagaactcttcaaacaatccagaagtgtcacattgat
agtatcttcaccgagagcaaattcttgcaggctgattcattactgcagcttgcaagggca
cttatctgggctgcaggtcggcctcagaaagtgacaaactctcctgatgatgaagacaca
gcagttttctgcctggaacttcttattgctattactctaaacaacagagatagaattgtg
attctttggcagggtgtatatgagcatattgccaatatagttcagtccactgtgatgcct
tgtgctcttgtagagaaagcagtttttggactcctgcgcatttgtcaaagactgcttcct
tacaaggagaatcttgctgatgagctgttaagatcacttcaattagttttgaagcttgat
gcacgtgttgcggatgcttactgcgagaatattacacaagaggtgacacgcctagtgaag
gcaaatgctactcacatcaagtctcagatgggttggcggaccattatgtccttgctctct
atcacagctcgccatccagaagcttctgaagtaggtttcgaagctctggtttttattatg
tctgatggggttcacctttcaccagcaaactatgttctctgcattgaagcttcaagacag
tttgccgagtctcgggttggcctaacagataggtctgtccgcgcaatggatttcatggca
gagtctgtaaactgtcttgtgcgctggtctaaagagtctaaggaagcaggtgaggaagct
gaaaagatatcagaaggaataagggagatgtggctgagactgctgcaagcattgagaaag
gtgtgcctggatcagagggaggaagtgaggaatcaagcattgtcttccttgcagagatgc
ttggttggatcagaagggatatccctcatgcccacatcttggttgcaggcatttgatcac
gttatttttgcaatgcttgatgacttgctagagattgctcagaaccactcacagaaagac
tacaggaacatggaaggaagccttctgcttgccatgaagttactggcaaagattcatctg
cagcttcttccagagctctttggacttagcagcttctgcaaattttggctgggggttctt
agtcggatggagaagtacatgaaggttaaggtgagaggtaagaggagtgagaagctacaa
gagttgattccagaactcctcaaaaacacattgttagtaatgaaagcaagagggatcctt
gcaaagaggagcacaataggtggcgatagtttgtgggagttaacatggcttcatgtgaac
aacatttcaacatctttgcagtcggaagtgttccaaggtcaggaatcagacctaggtagt
tcaatacaacctgatggtgctggttcggggccgccaggtgaggtatcaggagatcagact
tga
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