KEGG   Typha angustifolia (narrow-leaf cattail): 140758768
Entry
140758768         CDS       T11061                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140758768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140758768
Membrane trafficking [BR:tang04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    140758768
SSDB
Motif
Pfam: Vps35 Sulfatase
Other DBs
NCBI-GeneID: 140758768
NCBI-ProteinID: XP_072951156
LinkDB
Position
4:join(5132542..5132643,5132722..5132818,5132894..5133020,5133790..5133975,5144254..5144341,5144540..5144596,5144681..5144770,5144850..5144972,5146999..5147073,5147155..5147214,5150661..5150777,5151121..5151360,5151436..5151501,5151718..5151807,5157150..5157239,5158102..5158191,5164981..5165049,5165127..5165207,5165367..5165474,5165625..5165728,5166112..5166225,5166310..5166523)
AA seq 795 aa
MTLPPDAGAEDEEKYLAEGIAGLQHNAFYMHRALDTNNLKDALKFSAQMLSELRTSRLSP
HKYYELYMRAFDELRKLEMFFREESKRGNCSIIDLYELVQHAGNVLPRLYLLCTVGSVYI
KSKEAPAKDVLKDLVEMCRAIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDADTVNDAV
EFVLQNFIEMNKLWVRMQHQGPMREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKE
TVLPRVLEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPTVDIKTVLS
QLMDRLSNYAALSTEILPEFLQVEAFGKLSSAIGKVIEAQVDMPVVGVITLYVSLLTFTL
RVHPDRLDYVDQVLGACVKKLSGKAKLEDGKATKQIVALLSAPLEKYNDIVTALKLSNYP
RIMDHLDNSTNKVMAVVIIQSIMKNTTFISTSDNVEALFELIKGLIKDIDGARDDELDEE
DFKEEQNSVARLIHMLHNDDPDEMMKIICSVRKHILLGGLKRLPFTVPSLVFSALKLVRR
LQGQDGDVVGEEVPATPKKIFQILHQTIEALSSVPSPELALRLYLQCAEAANDCDLEPVA
YEFFTQAFILYEEEISDSKAQVTAIHLIIGTLQRMNIFGVENRDTLTHKATGYSAKLLKK
PDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGSVALFI
EILNKYLYFFEKENPQITSSVIQGLIELITTEMQSDNATSDPSADAFFASTLRYIQFQKQ
KGGSMGEKYESIKVN
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgacgttgccaccggacgcgggcgccgaggacgaggagaagtacctcgccgagggcatc
gccggcctccagcacaatgccttctacatgcaccgcgccctcgatacgaacaatttgaag
gacgcgctcaagttctcggcacagatgctgtcggaactgcggacctcgcggctctcgccc
cacaagtactacgaattgtacatgcgggcgtttgatgagttgaggaagctggagatgttc
ttcagggaggagagcaagcgtggcaactgttcgatcattgatctgtacgagctcgtgcag
cacgccggcaatgtcttgcccaggctgtatctcctctgcacagtaggatctgtatacata
aaatcaaaagaggctcctgccaaggatgttcttaaggaccttgtagaaatgtgccgtgcc
attcaacatcctctacgtgggcttttcttaagaagttatctctctcaaattagcagggat
aagttgccagatattggttctgagtatgaaggggatgctgacactgttaatgatgctgtt
gagtttgttctgcaaaacttcatagagatgaataaactctgggtccgaatgcaacatcag
ggacctatgcgggaaaaagaaaagcgggaaaaggaaaggagcgaacttcgtgatcttgtt
ggaaagaatcttcatgttctaagtcagatagagggtgtggaccttgatatgtacaaagaa
actgttcttcctagggtgttggaacaggttgtcaattgtaaagatgacctggcccagtat
tacttgatggattgcataatccaagtttttccagatgaatatcatttgcagactcttgaa
acattactaagtgcatttccccaacttcagccaactgttgatatcaaaacagtcttgtct
caacttatggatagattgtcaaattatgcggctctaagtacagaaatactgccagaattc
ttgcaagttgaagcatttggaaaattaagcagtgccattggaaaggtgatagaagcacag
gttgacatgccagttgttggagttataactttatatgtttcccttctaacatttactctc
cgtgtacaccctgatcggcttgattatgtggatcaagtactgggagcatgtgtcaagaaa
ctttcgggtaaagcaaagcttgaagatggcaaagccacaaagcaaattgtcgcacttctg
agtgctccattggaaaagtataatgatatagtcactgcactaaaactttcaaactatcca
cgaattatggatcacctggacaacagcacaaacaaagtgatggctgtggttattattcaa
agcatcatgaagaacactaccttcatatcaacttctgataatgttgaggctctatttgaa
ttaataaaggggttgataaaggatattgatggggctcgagatgatgagcttgatgaagag
gatttcaaggaggagcagaactctgtcgcacgcctcattcacatgctgcacaatgatgac
cctgacgaaatgatgaagattatatgttctgttaggaagcatattcttcttggaggtctt
aagcgtctacctttcactgtgccttcattagttttctctgctcttaagttggtaagacgt
ttacaaggtcaggatggagatgttgtgggagaagaggttcctgcaacacctaagaaaata
ttccaaatattgcatcagacaattgaggcattgtcatctgttccttctccagaacttgca
ctaaggttatacttgcaatgtgcagaggctgccaatgattgtgacctagaacctgttgca
tatgaatttttcactcaagcattcatattatatgaagaggagatttcagattcaaaagca
caggtgacagcaattcacttaataataggaactttgcagcggatgaacatatttggggtt
gagaatagagatacactaacacacaaagcaacagggtactcagcaaaacttttaaagaag
cctgatcagtgtagagctgtatatgcatgttctcatctcttctgggttgatgatcaggat
gggataaaggatggtgaaagggtcctcctttgcttaaagcgtgctttgaggattgcaaat
gctgctcaacaaatggctaatgttacaaggggaagcagtgggtccgttgcactcttcatt
gaaatactgaacaagtacttatacttctttgagaaagaaaatcctcagatcacaagctct
gtaattcaaggtctgatcgaattgatcacgactgagatgcaaagcgacaatgcaacttct
gatccatctgctgatgctttctttgccagcacacttcgatatattcagtttcagaagcaa
aagggtggatctatgggtgaaaaatatgagtccataaaagttaattga

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