Typha angustifolia (narrow-leaf cattail): 140758774
Help
Entry
140758774 CDS
T11061
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140758774
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
140758774
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
140758774
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_long
PRORP
PPR_2
TPR_24
PPR_3
RNase_Zc3h12a
PPR_1
Motif
Other DBs
NCBI-GeneID:
140758774
NCBI-ProteinID:
XP_072951166
LinkDB
All DBs
Position
4:complement(join(9725758..9725898,9726451..9726519,9727017..9727137,9727703..9727884,9728014..9728103,9728787..9729932))
Genome browser
AA seq
582 aa
AA seq
DB search
MPLALSPSLFRATTSSAFLSKSLFLFSPPHYNSYYVRRRFSTNPLLSLRRFAKHPSSKSF
RRTMPSSPSSRSTQTLTPENPSAPPSTTKARRKAWRESPEGLLRHELDMCSKRGDLPEAL
RLYDTAVATSVNLSLHHYNVLLYLCSSSEDGSGIERGFEIFRKMTSDAVEPNEATFTSAA
RLAALKRDPALAFDLIKRMSAAGIPPKLRSYGPALFGFCDAGDFDNAHEVESHMATSGVV
PEEPELAALLRVNAGKGRGDDMYRVLHRMRRIVRQVSDSTAEVMEGWFGSEAAAEVGMEE
WDVGRVKEGVVKGGGGWHGQGWLGKGQWSVGRSEMDEDGTCRRCGEKLVCIDIDPLETED
FAKSLSALACQREVKADFLGFQEWLDRNGPFDAVIDAANVGLYNQRNFSFFQLNSVVNGM
RQMSRSNKLPLIILHSGRVKGGPAKTPDNKKLIESWRKSGALYATPPGSNDDWYWLYAAV
NCRSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTFSRKGPAFHMPPPYSIVIQESER
GCWHLPTNLGDDIETPRKWICATRNTTMELSQSSRRLSQISW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgccactggctctttccccctccctcttccgcgccaccacctcttccgccttcttgtcc
aaatccctcttcctcttctcccctcctcactacaactcctactatgtacgccgccgcttc
tccaccaaccctctcctctctctcaggcgtttcgccaaacacccttcctccaaatctttc
cgccgcaccatgccttcttccccttcctctcgctccacccaaaccttaacccctgaaaac
cctagcgctcctccttctaccaccaaggccaggcggaaggcttggcgcgagtctcccgag
ggtctcctccggcacgagctcgacatgtgctccaagcgcggcgacctccctgaagccctc
cgcctctacgacactgccgtagccacctccgtcaatctgtccctccaccactacaatgtc
ctcctctacctctgctcctcctcggaggatggcagcggcatagagagaggcttcgagatc
tttcggaagatgacctcagacgccgtggagcccaatgaggccaccttcaccagcgccgcc
cgccttgctgcgttgaaacgggacccagcccttgccttcgacttgatcaagcggatgtcg
gcggctggcatcccaccaaagcttagatcatatggcccggctctctttggattctgtgat
gccggggattttgataatgcccatgaggtggagtcgcacatggccacctcgggtgttgtt
cccgaggagcctgagttggctgcgctccttagggtgaatgccggtaaggggaggggggat
gatatgtaccgggtgctccaccggatgaggcggattgtgagacaagtgtcagattcaacg
gcagaggttatggaagggtggtttgggtctgaggcagccgcggaggtggggatggaggag
tgggatgtggggagggtgaaggaaggggtggtgaaaggtgggggcggttggcacgggcag
gggtggttgggaaaggggcaatggagtgtgggaaggagtgagatggacgaggatggtacg
tgccggcggtgtggggagaagttagtgtgtatagatatcgatccattggagactgaggac
tttgcgaagtccctttccgccttggcttgccagagagaggtcaaagctgatttcttgggc
tttcaggaatggctcgaccgtaatggcccatttgatgctgttatagatgctgcaaatgtc
ggcctctataatcaaaggaatttcagctttttccagctaaattctgttgtaaatggaatg
cgtcaaatgagccggtcaaataagttgccacttattattttgcatagcggccgtgtaaaa
ggtggtcctgcaaaaaccccagacaataagaagcttatagaaagctggcggaagtctgga
gcactatatgctacccctcctggttcaaatgatgattggtattggttgtatgcagctgta
aattgtcgttcactgcttgtgacaaatgatgagatgagagatcacttatttcaactacta
ggaactagcttcttccccagatggaaagagaagcatcaggtgagactaacattctccaga
aagggtccggctttccatatgcctccaccatactccattgttatacaggagtctgaaaga
ggttgctggcatttaccaacaaatttaggtgatgacattgaaacacctcgcaagtggatt
tgtgctaccagaaatactactatggaattgtctcaatctagtagacgattaagccaaata
agctggtaa
DBGET
integrated database retrieval system
