Typha angustifolia (narrow-leaf cattail): 140758786
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Entry
140758786 CDS
T11061
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140758786
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
LRR_NXF1-5
F-box
UCR_14kD
Motif
Other DBs
NCBI-GeneID:
140758786
NCBI-ProteinID:
XP_072951186
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Position
1:complement(join(10848084..10848863,10848953..10849448,10850256..10850707))
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AA seq
575 aa
AA seq
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MTYFPEEVVEHIFDFLGSHGDRNTVSTVCKAWYRVERLSRRNVFVGNCYAVRPERVAARF
PRVRSLSVKGKPHFADFNLVPPDWGGFAATWIEAMARGCPGLEELRMKRMVVSDECLELL
ARSFPNFKALVLVSCEGFSTDGLAAIATHCRSLKELDLQENEMEDRGPQWLSCFPDSCTS
LISLNFACLKGEVNAGALERLVSRCPNLRSLRLNRAVSAETLAKVLTKAPQLVDLGTGSF
MLDHRSEAFHKLFDAIQKCKSLRSLSGFWDASPLCLPAIYTICANLTGLNLSYAPAIQGF
DLIKLIRHCWKLQRLWVLDSIGDKGLAVVASTCKDLQELRVFPSDIYGAGSAAVTEEGLV
AISSGCPKLNSLLYFCDQMTNAALITVAKNCPNFIRFRLCILEPRKPDAVTNQPLDEGFG
AIVQSCKDLRRLSLSGLLTDQVFLYIGMYAERLEMLSIAFAGDSDKGMAYVLNGCKNLRK
LEIRDSPFGDAALLEDVGKYETMRSLWMSSCDVTLGGCKVLASKMPRLNVEVINERDESD
ELEENPSDLHKVEKMYVYRTIAGPRNDAPDFVWIL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttacttcccggaggaggtggtggagcacatctttgatttcctgggctcgcacggc
gaccggaacacggtgtcgacggtgtgcaaggcgtggtaccgcgtcgagcggctgagtcgc
cggaatgtgttcgtcggtaattgctacgccgtccggccggagcgggtggcggcgaggttc
ccccgggtgagatcgctcagcgtcaaggggaagccccactttgcggacttcaatttggtc
ccacccgattggggagggtttgcggcgacatggatcgaggccatggcccggggttgcccg
ggcctcgaagagctaagaatgaagaggatggtggtctcagatgagtgtttggagctattg
gcgcgatccttccctaatttcaaggctcttgttcttgttagctgtgagggttttagcact
gatgggctcgcggcgatcgcaactcattgcaggtctcttaaggagctagacctacaggaa
aatgagatggaggatcgtgggcctcagtggcttagttgcttccctgattcctgtacttcg
ctcatatctctaaactttgcctgcctgaaaggggaggtgaatgctggagcattggagaga
cttgtttctaggtgcccaaaccttaggagcttgaggcttaatagggcagtatctgcagag
acattagctaaggtcctcacaaaagctcctcagctggtggacttgggaacaggttcattc
atgctcgatcatcgttctgaagcctttcataagctgttcgatgccatccaaaagtgcaaa
tcactaaggagcttgtcaggattttgggatgcttctcctctgtgtcttcctgctatctat
accatctgtgcgaacctgactggtctaaacctcagttacgcgccagcaattcagggtttt
gacctcatcaagctgatccgtcattgttggaaacttcaacgcctctgggtattggatagc
attggagataaaggattagcagttgtggcttctacttgtaaggatttgcaagagctaagg
gtattcccttcagatatctatggtgcaggaagtgccgctgtgacagaagaagggcttgtt
gctatatcttcaggatgcccaaaactgaattctttgctgtacttctgtgaccagatgaca
aatgctgccctaataacagtcgccaagaattgcccaaatttcatacgcttcagattatgt
attcttgagccaaggaagccagatgctgtgactaaccagccactggatgagggctttggg
gcaattgtgcagtcatgtaaagatctaagaaggctttctttatcaggccttctaacagac
caggtcttcttgtatattgggatgtatgccgaacggcttgagatgctctcaatagcattt
gcaggagatagtgacaagggaatggcatatgttctcaatgggtgcaagaatcttaggaag
ctggagataagggacagcccttttggtgatgctgcgcttttggaggatgtggggaagtat
gaaacaatgcgatccctttggatgtcgtcctgtgatgttacattagggggttgcaaggtc
cttgcatcaaagatgccgaggctcaacgtggaggtcataaatgaaagggatgaaagtgat
gaattggaggagaaccctagcgatctccataaggtggagaaaatgtacgtctatcggacc
attgccggaccaagaaatgatgccccagattttgtttggattttatag
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