Typha angustifolia (narrow-leaf cattail): 140758899
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Entry
140758899 CDS
T11061
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140758899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140758899
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140758899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
140758899
NCBI-ProteinID:
XP_072951391
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Position
4:complement(join(3303508..3304680,3304823..3305044))
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AA seq
464 aa
AA seq
DB search
MESDLGKLFIGGISWDTNEDRLREYFKSYGEVVEAVIMKDRTTGRARGFGFIVFADPVVA
ERVVMEKHIIDGRMVEAKKAVPRDDQNILNRNGGSTHGSPAPDRTKKIFVGGLPSTITEI
DFKKYFDQFGTIIDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKTFHELNGKMVEVKR
AIPKELSPGPNIRSPVGGYSYGLNSRVNGFLNEYTQGCNLSLIGNYGMRLDSRLGSLANG
RNGYPSFGPGFGTGMNFESGLSSPIGGNSDTNDNLGYGQDLNPYYSGSSSRFSNPVGGYR
GGTSNSGLGFNPLTHNVWGSSGLNFNTTSENTNAYTTSGSESIGSFGNNSLDWGVSYSPI
SGQGARSGAGYGGVSAGYGRENGSSLGSSFGRNNGFGSTNVSLSSSRDGYEGAYERLYRG
SSVYGDPTWRLAPSELDASGPFGYGLDIATSDIMAKGSAGYMGG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatcttggcaagctcttcattggtggcatatcctgggataccaatgaagac
cgcctccgggagtacttcaagagttatggagaggtggtcgaggcggtgatcatgaaggac
cggaccactggccgagcccgtgggttcggattcattgtgtttgctgaccctgttgtcgct
gagagagttgtcatggagaagcacattattgatggacggatggtggaggccaagaaagct
gttcccagagatgaccagaatattctgaataggaatggtggtagcacccatggctcacca
gctcctgatcgtaccaagaagatatttgttgggggcctgccatctaccattacagagatt
gatttcaagaagtacttcgatcagtttgggacaataatcgatgtcgttgtgatgtatgat
cacaacacccagaggccaaggggttttggtttcattacttatgactcagaggatgctgtg
gataaggtcttgctcaaaaccttccatgagctgaatggtaagatggtggaggttaagaga
gccattccaaaagaactatcgcctggaccaaatatccgctctcctgttggaggctatagc
tatggtctgaatagtagggtcaatggttttctaaatgagtatactcagggatgcaatctg
agcttgataggtaattatggcatgagattggacagtaggttgggatcattggctaatggg
aggaatggctacccttcatttggtcctggctttggaactggaatgaattttgagtctggg
ttgagctcccctattggaggaaactcagatacaaatgataaccttggctatggacaggat
ttaaacccctattatagtgggagttccagtagatttagtaacccggttggtggatatcgt
ggaggtactagcaattctggcttaggttttaacccattgactcataatgtatggggtagc
agcggtcttaatttcaatacaacatctgaaaatactaatgcatacacgacctctggaagt
gaaagcattggcagttttggaaataacagcttggactggggtgtatcttattctcctatt
tcaggtcaaggtgcacggagtggtgcaggctatggtggtgtctctgcgggttatggaaga
gagaatggttccagcttaggttccagttttggtaggaacaatggatttggctctacaaat
gtttctctcagttcatcacgtgatggatatgaaggagcatatgaaaggctataccgtggc
agttcagtttatggagacccaacttggcgtttggcaccttctgagcttgatgcttctggt
ccatttggatatggacttgacattgctacctcagacattatggccaaaggttctgcaggt
tatatgggtggttaa
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