KEGG   Typha angustifolia (narrow-leaf cattail): 140759039
Entry
140759039         CDS       T11061                                 
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like isoform X1
  KO
K23788  transmembrane E3 ubiquitin-protein ligase [EC:2.3.2.27]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140759039
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140759039
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140759039
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_11 zf-C3HC4 zf-C3HC4_3 zf-ANAPC11 zf-RING_UBOX zf-RING_16 Prok-RING_4 IBR_1 zf_RING_Vps8 ComC_SSD zf-RING_4 RINGv
Other DBs
NCBI-GeneID: 140759039
NCBI-ProteinID: XP_072951595
LinkDB
Position
4:complement(join(8737866..8737967,8738044..8738160,8740271..8740599,8743381..8743548,8750508..8750601,8750790..8750849,8750941..8751098,8753139..8753216,8753294..8753357,8756197..8756257,8757451..8757566,8764099..8764226,8770739..8770811,8772837..8772944))
AA seq 551 aa
MGVIVLLLFIGLIRHLEALRPLRERASVVSGSWGDEHAFLKRDDNELNSYSPWNITGTYK
GRWSFVESSNGSSRFLDFTKPNGVSVLELMSTPTKISGIHYIQGSITFHDVFDNEHDHGA
AQIRLEGVYIWPFKQLRMVANSGGESETLQEEEYFLSNPYHLLGVFSSQVFQESSRSKSR
RKYSLTYDMEKHCNIEIAAQVSRVPSSQNDGDHDRYRLEGLMESPAVGNDGDCLPPILVN
ATSLNIDVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDA
YLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLNSGEGWETMRR
ELSILYSRFYGILLGGIIIMYELHNFLRPILFIMYSFWTPQIVTNVIRDTRKPLHPQYIL
GMSVTRLAIPLYIFGCPSNFMHIEPDMKWCIYLGSFMGMQALILISQHYLGSRWFIPHQI
LPEKYSYHRKLENDTTQATDCVICMTGIDLAQRTNDYMMTPCDHLFHSGCLQRWMDIKME
CPTCRRSLPPA
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgggagtcatcgttttgctgctctttattgggttaattcggcatctggaggcgttgagg
cctctcagggagagggcttcggtcgtttctgggtcttggggcgatgagcatgctttcctt
aaaagagatgacaatgagctaaattcctattctccatggaatattacaggaacatataaa
ggaaggtggagctttgtggaaagctcaaatggctcttctaggtttctggactttacaaaa
cctaatggtgtgtctgtcttggaattaatgagcactccgacaaagataagtgggatacac
tacattcagggatcaattactttccatgatgtgtttgacaatgaacatgatcatggagca
gctcaaataagactagaaggtgtatacatatggcctttcaagcaactaagaatggtagca
aacagtggaggagagagcgagacacttcaagaagaggaatactttttgtccaacccatat
catttgttgggagttttctcctctcaagtgtttcaagaatcttccagaagcaaaagtaga
aggaaatattctcttacatatgatatggagaagcattgtaacatagagatagctgctcag
gtttcgcgtgtcccatcaagccaaaatgatggagaccatgataggtaccgtttggaggga
ttgatggagagtcctgctgttggcaatgatggagactgtctaccaccaattttagtgaat
gcaacttcactaaacattgatgtttactataacaaagcagttaattatacactgatggtc
acctttatctcttttcttcaagtgctactgttgatcagacaaatggagcatagtaacacc
caatctggtgcagctaaagtgtctattttgatgattgggcaacaagctattatggatgca
tacctctgtcttttgcatttgactgctggtatattagttgaatcactgtttaatgctttt
gcaacagctgccttcttcaaatttgtcgtattttctatttttgagatgagatatctcctt
gctatatggaaagcaagtcgacctttgaacagtggagaagggtgggaaacaatgaggcgg
gaactctctattctatatagtcgattctatggcattcttttgggaggcattattatcatg
tacgagttgcacaatttcttacgccctattcttttcatcatgtattccttttggacaccg
caaatagtcacaaatgtcatccgggatacgagaaagcccctacaccctcagtacatatta
ggcatgagtgtcactcggcttgcaattccattatacatatttggttgtccaagcaacttc
atgcacattgagccagatatgaaatggtgcatatatttgggatcattcatgggaatgcaa
gcattaatccttatatcacagcattaccttggttctcgttggttcattcctcatcagatc
ttacctgaaaaatacagctatcataggaagcttgagaatgatacaactcaagctaccgat
tgtgtgatatgcatgacaggaattgaccttgcacaacgaacgaatgactatatgatgaca
ccttgcgatcatttattccattctggctgcttgcaaagatggatggatataaagatggag
tgtcctacttgccggcgttctctgcccccagcatag

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