| Entry |
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| Name |
(RefSeq) polyadenylate-binding protein 7-like isoform X1
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| KO |
| K13126 | polyadenylate-binding protein |
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| Organism |
tang Typha angustifolia (narrow-leaf cattail)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140759465
09123 Folding, sorting and degradation
03018 RNA degradation
140759465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tang03019]
140759465
03041 Spliceosome [BR:tang03041]
140759465
Messenger RNA biogenesis [BR:tang03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140759465
mRNA cycle factors
Stress granule specific factors
140759465
Spliceosome [BR:tang03041]
Complex C
Other components
Complex C specific factors
140759465
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:join(2310120..2310300,2310699..2310817,2310936..2311129,2311321..2311583,2311676..2311782,2311880..2312069,2312146..2312432,2312534..2312683,2313176..2313367,2313499..2313696)
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| AA seq |
626 aa
MEVDPLTALYVGDVHPDVAESQLFDLFSSVGVVGSVRICKDLATGRSLGYGYVNYIAPQD
AMRAVEKLNHTLLYGKPIRIMWSNRNPDDRNSGMGNVFVKNLSSSTDDTRLQEIFSEYGT
ILSCKVSRDTDGKSRGYGFVQYDSQESAISAITKLNNSFHDGKQIYVAKFIKKSERLAAQ
NPEDKYTNLYMKNLDQDITEELIKVKFSEFGSIVTAKIEKDENGNSKGFGFCSFESADSA
KRAREAMDGVQLGSKTLYVARAQKKSERQQILRRLYEEKRNEKIRKSIDSNVYIKNIDES
LDDNALREHFSQCGNITSAKIMRDDKGISKGFGFVCYSTPEEAKKAVTTLHGQMFNGKPL
YVAMAQRKEERQAQFQLRYAYMAGLAGPPAVLPAGYPPVYYTPPNVVSQVSPRQGLMYQP
FGLRPEWRPRAFVPPSRPGFHPLPLPVMPNAPRQHRQNRGRMNGHMMPQPGQSTPYMSNL
QQANNSMFSSKHSTNQQQRSGQSKYMMNGNEPDIANGSMVQLSTSNSQGTEMLSSMLAAA
TPKQQKQMLGERLFPLVEKLKCDLAAKITGMLLEMDNSELLLLLESPESLAAKVEEAVQV
LNLSKGNVGDQESLHSNYLSAEVSVN |
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| NT seq |
1881 nt +upstreamnt +downstreamnt
atggaggtggatcccctgacggcgctctacgtcggcgacgtccaccctgacgttgccgag
agccagctattcgatctcttctcgtccgtcggggtcgtcggctctgttagaatctgcaag
gatctcgccaccggaaggtcgctcggatacggctacgtcaactacattgccccgcaagat
gccatgcgcgctgtggagaagttaaatcatacgctcttatatggcaaacctatcagaatt
atgtggtccaaccgaaatccagatgataggaacagtgggatgggaaatgtgtttgtgaag
aacctaagcagctctactgatgacacaaggcttcaagagatattttcagagtatgggact
attttgtcttgtaaagtatctagagatacagatgggaagagcagaggatatggatttgtt
cagtacgattctcaggaatcagcaatttctgctatcacgaaactcaataactcctttcat
gatgggaagcaaatttacgttgctaagttcataaaaaagagtgaacgtcttgctgcacaa
aatcctgaagataaatacaccaacttatacatgaagaacttggatcaggacataacagaa
gaacttattaaagtgaagttctctgaatttggttcaatagttactgcgaagattgaaaag
gacgaaaatggaaattcgaagggttttggattttgtagttttgaaagtgctgatagtgcc
aaaagagctagggaggcaatggatggagtccaacttggatcaaagaccctgtatgtggca
agggcccagaaaaaatctgaacgacagcagattttgcggcgtttgtatgaggagaagagg
aatgagaaaatcaggaagagcatagattcaaatgtttatataaagaatattgatgaatct
cttgacgataacgctctccgcgaacactttagccaatgtggcaacatcacttctgccaaa
atcatgcgcgatgacaaagggatcagtaaagggtttgggtttgtctgctatagcactcca
gaggaagctaagaaagctgtcaccactctgcatggacagatgttcaatggaaaaccttta
tatgttgcaatggctcaaaggaaagaggaaagacaagctcaatttcagcttcgttatgct
tacatggcggggttagcaggaccaccggctgttttgcctgctggatacccccctgtttac
tatactcctcctaatgttgtctcccaagtttctccaagacagggtcttatgtatcaacca
tttggactgagacctgaatggaggccaagggcctttgttcctccatcaaggccaggtttc
catccgctgcctcttccagtgatgccaaatgctccaaggcagcatagacagaatagagga
aggatgaatggacatatgatgcctcaaccagggcagtctactccatatatgtcaaattta
caacaagctaacaattctatgttctcttcaaaacattctaccaaccagcagcagcggtct
gggcagagcaaatacatgatgaacggaaatgagcctgatatagctaatggctcaatggtt
caactcagtacttcaaactctcaaggaactgagatgctcagtagcatgcttgctgcggcg
acaccaaagcagcaaaagcagatgcttggggaacgtctctttcccctggttgagaaactt
aagtgtgatctcgctgcaaaaatcaccggaatgctcctggagatggacaactccgagttg
ctgctgctattggagtcaccagagtcattagctgctaaagtggaagaagctgtacaagtt
cttaatctctccaaaggcaacgtaggtgaccaagagagcttacattccaattatttgtcg
gcggaggtttctgtcaactga |
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