Typha angustifolia (narrow-leaf cattail): 140759686
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Entry
140759686 CDS
T11061
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140759686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140759686
Spliceosome [BR:
tang03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
140759686
Complex B
140759686
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
140759686
NCBI-ProteinID:
XP_072952418
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All DBs
Position
4:join(8677317..8677324,8677425..8677467,8682121..8682162,8682254..8682524,8688351..8688652)
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AA seq
221 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQQVGATFNQHLLSLPGNVQRPRLPVLPPPILPIGASSAPLIPGVRPPVLPTPVGA
PGYAGAPTMSPTVVPPGATSMPMSMTNLPRPPTLMPPASGSLTTPNSSAPMGNPLLYQSS
SLPSASSYDGYGVSTAPGSQGAAPAVSQSGFSYSQPSESNH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactactgcgactactgcgatacttacctcacgcacgattccccatctgtc
aggaaacaacacaatgctggatataagcacaaggcaaatgtacgctcctattatcagcaa
tttgaggagcaacaaacacaaagtttaattgaccaaagaatcaaggagcatctgggacag
gctgcagctttccaacaacaagtaggtgccacttttaatcaacatcttctctctctccca
ggaaatgtgcagaggcctcgtcttccagttttgcccccaccaattttgccaattggagca
tcttctgcacctttaatcccaggagtcagaccccctgttttgccaacaccagttggtgct
ccaggttatgctggtgctccaactatgtcaccaacagttgtaccccccggtgctacttca
atgccaatgtcaatgacaaatcttccgaggcccccgacattgatgcctccggcttcagga
tccctgacaacacctaacagctcagcacctatgggcaatcctttgctgtatcagtccagt
tcattgccctccgcctcaagctatgatggttatggtgtttctactgcaccaggatcacaa
ggagctgctcctgctgtttcccaatctggcttttcatattcccaaccctctgagtcgaac
cactga
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