Typha angustifolia (narrow-leaf cattail): 140759700
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Entry
140759700 CDS
T11061
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140759700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140759700
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140759700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
SET1_RBD
RRM_Nup35
RBD_RDR6
RRM_3
Motif
Other DBs
NCBI-GeneID:
140759700
NCBI-ProteinID:
XP_072952433
LinkDB
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Position
4:join(724925..725197,725770..726636)
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AA seq
379 aa
AA seq
DB search
MEPSSSSSSLSSSPSSEKGKLFVGGISSETREEALMEHFKKYGEVKEVVVMRDRNTGNGR
GFAFVQFLDPQAAERALEEKEKEKHVIRGRTVEVKRAIPRSEQNQNHQSSQNLYPDQSPH
QNRVPSRDNTNSYNDNGSHSTLKKIFVGGLPDNIRESEFRNYFAKFGTITDVVVMYDPST
QRPRGFGFITFDSEEAVRVVTENNFHELNGKMVEVKRAVPKDGNNHSNNNNHNDGSYNSR
MLGAIGPSFAVYQGVYPPYGHRYGFGPFGYMSAPIPSYPYAGYGIGSYGGLNYGNVFPGP
RGPWSGHGMMARRSMMPYGNLTTYSSYVNGGGYKNVPGGGHRGVSSFSDGKGNQAGQDVQ
SATVTGAITTQMEAVKLDA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcgtcttcttcttcgtctttgtcgtcttcgccatcgtctgagaaggggaag
ctcttcgtcggagggatctcgtcggagacgagggaggaggcgctcatggagcacttcaag
aagtacggggaggttaaggaggtggtggttatgcgggatcggaacaccgggaacggaagg
ggttttgcgtttgtccaatttttggatccgcaggcggcggagagagctctcgaggagaag
gagaaggaaaagcatgtgattcgtggaagaacggttgaagtgaagagagcaataccaaga
agtgaacagaatcaaaatcaccaatcctcccaaaacctatatccagatcagagtccacat
caaaaccgagtgccaagtagggataacactaacagctataatgacaatgggagtcactct
actttaaagaagatttttgtaggtggtttgcctgacaatattagggagtctgagtttaga
aattattttgcaaagtttggtacgataactgatgtggttgtgatgtacgatccttctacg
cagaggccaaggggctttggttttattacctttgattcagaggaagctgtgagggtagtg
acagagaacaatttccatgaattgaatgggaagatggtagaggtcaagagagcagtgcct
aaggatggcaataaccatagcaataacaacaatcataatgatggaagttacaattctaga
atgttgggcgcaatagggccgtcatttgctgtttatcaaggagtatatccaccttatggt
catagatatggttttgggccttttggctatatgtcagcccctattccttcatatccttat
gcagggtacggtatcggaagctatggtggactaaactatggaaatgtgtttccaggccca
aggggcccttggagtggccatggtatgatggccagaaggagtatgatgccctatggcaat
ctcaccacgtattcaagctatgtaaatggaggaggatacaagaatgtgcctggtggtggt
catcggggggtttctagtttcagtgatggcaaaggaaatcaagccggccaagatgtgcaa
tcagcaacagttactggagcaattacaacacagatggaggctgtcaagttggatgcttaa
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