KEGG   Typha angustifolia (narrow-leaf cattail): 140759877
Entry
140759877         CDS       T11061                                 
Name
(RefSeq) ras-related protein RHN1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144  Endocytosis
tang04145  Phagosome
tang04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140759877
   04145 Phagosome
    140759877
   04148 Efferocytosis
    140759877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140759877
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140759877
   04031 GTP-binding proteins [BR:tang04031]
    140759877
Membrane trafficking [BR:tang04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    140759877
 Endosome - Lysosome transport
    140759877
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140759877
  Exosomal proteins of other body fluids (saliva and urine)
   140759877
  Exosomal proteins of colorectal cancer cells
   140759877
  Exosomal proteins of bladder cancer cells
   140759877
GTP-binding proteins [BR:tang04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    140759877
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_24 TsaE AAA_16 SRPRB
Other DBs
NCBI-GeneID: 140759877
NCBI-ProteinID: XP_072952654
LinkDB
Position
5:complement(join(3189376..3189476,3189569..3189662,3191536..3191609,3191917..3191965,3192636..3192803,3192884..3192961,3194918..3194956))
AA seq 200 aa
MSTMGSSNLQAKLVLLGDMGTGKTSIVLRFVKGQYFDCQESTIGAAFFSQILSLNEATIK
FDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSSDSFTRAQKWVQELQRQGNPYLVMAL
VGNKVDLETKRKVEAEKGMQYAEENGLFFIETSAKTAENINELFYEIAKRVIKARPSQQT
GVNLHNNARISGVRRFCCSV
NT seq 603 nt   +upstreamnt  +downstreamnt
atgtcgacgatgggaagcagcaatttgcaggcgaagctggtacttcttggagatatggga
actgggaagaccagtatagtgctaagatttgtgaaaggacaatattttgattgccaggaa
tcaacaattggtgctgcatttttctctcaaattctgtcactaaatgaagctaccataaaa
tttgatatatgggacacagcaggacaagaacgatatcatagtttggctccaatgtattat
cgtggtgcagctgcagctattgtcgtgtatgatatctcaagtagtgattcatttactcga
gcacaaaagtgggttcaagaacttcaaagacaaggaaatccatacttggtcatggcattg
gtgggtaacaaggttgacttggaaacaaagaggaaggtggaagccgagaaaggcatgcaa
tatgctgaagaaaatgggctgttctttatagaaacttcagcaaagactgcagaaaacatc
aacgagctattttacgaaattgctaagagagttatcaaagcacgaccttcacagcaaacc
ggggtgaatctgcacaacaatgcacgaatcagtggcgtaagacgcttttgttgctcagta
tga

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