Typha angustifolia (narrow-leaf cattail): 140759921
Help
Entry
140759921 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140759921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140759921
Transcription factors [BR:
tang03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
140759921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140759921
NCBI-ProteinID:
XP_072952728
LinkDB
All DBs
Position
5:join(3504883..3505074,3505183..3505284,3505378..3505443,3505555..3505620,3514146..3514463,3515068..3515137,3515230..3515398,3515476..3515530)
Genome browser
AA seq
345 aa
AA seq
DB search
MGLDREQGDEVRFDPMPFPSSFNPYSAAADSMRVWSCGGEELGAEDERGKNLDQDFESQD
CESEEGLEVSGDPAKPGRPRSSGSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK
TDKASMLDEAIEYLKQLQLQVQMLSMRNGLYLNPTYFSGGLQSLQGSQMSMGLGVNNVTG
INVGGSMLPLNHDSAQGVQHAYHQLNHGTSSHQSVVLPSVVNITLPEPSGRTESSPHLGS
FQFPVCAEEIFRADIVPKHQLTSGQATTNLPETEMKSMGVGASLHFTGQASSMVDVDQLE
GCRLGRERLPIMVAKNQESHTIIQHLHGLHCGNIDADTKAEPKDL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagatagagagcaaggagatgaggtgagatttgacccaatgccgtttccttcg
tcttttaatccttactccgctgccgccgactccatgagggtttggagctgcggaggggag
gagctgggtgcggaggatgagagggggaagaatctggatcaggattttgagtcccaggac
tgcgagagcgaggaaggactggaagtgtccggggaccccgcgaagcccgggcggccgcgg
agttccgggagcaagaggagtagagctgcggaggttcacaatttgtcggagaagaggagg
aggagtaggattaatgagaaaatgaaagcactgcagaatctgataccaaattctaacaag
acggataaggcttcgatgcttgatgaagctattgaatatctcaagcagctccagctccaa
gtacagatgctttcaatgcgaaacggcctatacctaaatccaacttatttttctggagga
ttacagtctctgcaaggctctcagatgtccatggggctcggtgtgaataatgtcacagga
ataaatgtaggaggaagcatgctgcccttgaatcatgattcagcacaaggtgtgcagcat
gcgtatcatcaattaaatcatggcacatcttcccaccaatctgttgtcttacccagtgtg
gtaaatattactcttcctgagccttctggtaggacagagtcatcgccacaccttggatcc
tttcaattccctgtatgtgctgaggaaatctttagagccgatatagtgccaaagcatcaa
ttaacttccgggcaagcaacaacaaacctcccagaaactgagatgaagtccatgggtgtg
ggtgcttctctgcattttactgggcaagcatcatctatggtggatgtggatcagttagaa
ggatgcagattaggcagagaaagattaccaattatggtagctaagaatcaagaaagccac
accattattcagcatttgcatggcttgcattgtggaaatattgatgccgatacgaaagca
gaaccaaaagacttgtga
DBGET
integrated database retrieval system
