Typha angustifolia (narrow-leaf cattail): 140759950
Help
Entry
140759950 CDS
T11061
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140759950
04121 Ubiquitin system [BR:
tang04121
]
140759950
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
140759950
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
140759950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
140759950
NCBI-ProteinID:
XP_072952774
LinkDB
All DBs
Position
5:complement(8301753..8305082)
Genome browser
AA seq
1109 aa
AA seq
DB search
MQPVVSEISHARHDRRTRSTSSAGAVDRPPHRAAGANRREWVPRGSTHAPSPAAVPTTGR
NPNPTPTPTPSPSPIPNLNPNPSRHRHRHRRPAPAPKPEQEEGEGGYLDPTAGIPQLVQE
IQDKLSRGAVECMICYDMVRRSASIWSCGSCFSIFHLHCIRKWARSPTSAENPGVAASES
GGSGWRCPGCQSVQDVAAKDLSYTCFCGRRRDPPNDFFITPHSCGEPCGKPLGGSQPQDF
GNGDDRCPHSCVLQCHPGPCPPCKAFSPSLPCPCGKKTFVRRCADRSSLLSCGLQCNRLL
SCGRHRCVDICHSGPCRPCQVLVGASCFCMKKSEMVLCGDMSVKGKLDGIDGVFSCNSIC
GRPLLCGNHFCKEICHPGPCGECESLPGKIKTCHCGKTTLLKQRESCLDPIDTCSGVCGK
VLPCGIHQCKETCHEGDCAPCLVRVQQKCRCGSSSRTVECHKVSEKDGFLCDKPCGRKKS
CGRHRCSEHCCPLSRFSGQLAEGGWDPHVCLMACGKKLRCGQHSCQLLCHSGHCPPCIET
IFTDLTCACGKTSIPPPLPCGTPTPSCSHSCLVPQQCGHAASHTCHFGDCPPCTVPVVKE
CVGGHVLLRNIPCGSKDIRCNHLCGKTRQCGMHACAKICHPPPCDPSCASEDSTSASGVK
ASCGQGCGAPRRDCKHTCTAPCHPSSPCPDLRCDSPVTITCSCGRITATVPCSAGGITSG
FNADSIFESSIIPKLPVPLQPLEVNGTKLPLGQRKLACDEECGKLERKRVLADAFDITPP
NLDALHFGENSAASDLLGDLFRREPKWVLAVEERCKFLVLGKAKGGSGSNLKVHVFCLMM
KEKRDAVRHIAERWKLSIHSAGWEPKRFVVVHVTPKSKPPARILGAKPGTPVTAPHPLPF
DPLVDMDPRLVVAMLDLPRDADVSALVLRFGGECELVWLNDKNALAVFSDPVRAATALRR
LDHGSAYQGAVVVVIQNGGGASVPSSNNAWGLGPKDGVAAKSSNPWKKALVQESDSSWGG
QWSAGSDDATRTVWRGNEAALFLTSTNRWNVLDSDSSMNLMAPEPTDDLNIIARVESGSA
VEPTTAGVSSSGIKTETLEEVDNWEDACE
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggtcgtctccgagatctcccacgcccgccatgaccgtagaacaagatccacc
tcttccgccggcgcagtcgaccgtcctccacatcgtgccgccggcgccaaccgccgggag
tgggtcccgcgcggatccacccatgccccctcccctgccgccgttccgactaccggtcgg
aacccgaacccgacaccgacaccgacaccgtcaccgtcaccgataccgaacctgaatcct
aacccctctcgccatcgtcaccggcatcgccgcccggcgccggctcctaagcccgagcag
gaggaaggagagggaggatatcttgatccgacggcggggataccacagctggtgcaggag
atccaggacaagctctcccgtggcgccgtggagtgcatgatttgctacgacatggtacgg
cgatcggcctcgatctggtcgtgcgggagctgcttctccatcttccacctccactgcatc
cgcaagtgggcccgctcccccacctccgcagagaaccccggagtcgcggcatctgaatcc
ggtggcagcgggtggcgttgtcctgggtgccaatctgtgcaagacgtcgcagccaaagac
ctctcctatacatgtttctgcggccgccggcgggatcctcccaatgatttcttcatcacg
ccgcattcttgcggcgagccatgcgggaaacctctcggtggaagccaaccacaagatttt
ggtaatggcgacgaccggtgccctcactcgtgcgtgctccagtgccaccccggtccatgc
ccgccttgcaaggcgttttctccaagcctaccttgcccttgcggtaagaaaacctttgtg
cggaggtgtgctgatagaagcagtctgctgtcttgcggcttgcaatgcaatcggctgctc
tcttgcggccgccaccgctgcgtcgacatttgccactctggtccctgccggccctgccag
gttcttgttggtgcctcttgcttttgcatgaagaagagcgagatggttctttgcggagac
atgtctgtcaaaggcaagttagatgggatagatggagtcttctcgtgtaattccatttgt
gggcggccgcttctttgtggcaaccatttctgcaaagagatttgccatccagggccttgc
ggggagtgcgagtcattgcctgggaagatcaagacttgccattgtggaaagactactttg
ttgaagcaacgggagagttgcttggatccaatagatacgtgttctggagtttgtggaaag
gtccttccttgcggcattcatcagtgcaaggagacttgccatgaaggggattgcgctcct
tgtctggttcgcgtccaacagaaatgtcgctgtgggtcgtccagccggacggtggagtgc
cataaggtttcagagaaggatggattcctctgcgataagccttgtggccgcaagaagagc
tgtgggcggcaccggtgcagcgagcactgctgtccattatctagattctctgggcagctt
gcagaaggtggttgggatcctcacgtttgcttgatggcttgtgggaagaagcttaggtgt
gggcagcattcatgccagttactatgtcatagtggccactgcccaccttgcattgagacc
atcttcactgatctaacctgtgcttgcggcaagacatctattccgccgcctctcccctgc
ggcactcctaccccgtcgtgctcccattcatgcttggttccccaacaatgcgggcacgct
gcctcacacacctgccatttcggggattgcccgccgtgtactgttccggtggtgaaggaa
tgcgttggagggcatgtcctgctgaggaacataccttgcggttcgaaagatatacgctgc
aaccacctctgtgggaagacacggcaatgtggtatgcatgcttgtgctaagatttgccat
cctcctccctgtgatccatcatgcgcttcagaggattctacctctgcctctggggtgaag
gcttcatgtgggcagggctgtggtgcccctaggagggattgcaagcacacctgcactgct
ccatgtcatccttcgtctccttgtcccgacctgagatgcgactcccctgttacaatcact
tgttcttgtggtcgaatcacagcaaccgtcccttgcagcgccggaggcatcactagtggg
ttcaatgcagattcaatatttgaatcctctataattccgaagttgccggttccgctgcaa
ccgttggaagtaaatgggacgaagcttcctcttggacagaggaagcttgcctgcgacgag
gaatgtggaaagctagagaggaaaagagtcctcgctgacgcattcgacattactccaccc
aatctggatgctttgcattttggggagaattcagctgcatcagatttgctcggcgatctt
tttcggagggaaccaaagtgggttttggccgtagaggagagatgcaagttcctggtgctt
ggaaaggcaaaaggaggtagtggaagtaacctgaaagtccacgtcttctgccttatgatg
aaggagaagagggacgctgttaggcacatagcagaaagatggaagctctcaattcattct
gcaggttgggagcccaagcgatttgtagtagttcatgttacacccaagtccaaaccaccg
gctcgaatcctgggtgccaagcctggcactcctgtgacggctccccatcccctacccttt
gatcctttggttgacatggatcccaggctggttgttgcgatgcttgatttgccacgggat
gccgacgtgagtgctttggtcctgcggtttggcggggaatgtgaactggtctggttgaat
gataagaatgctttagctgttttcagtgatccggtcagggcggctaccgccctaaggcga
ctggatcacgggtcggcttaccagggggcagtagttgttgtcatccagaatggcggcggg
gcatcggttccttcgtcaaacaatgcatggggtctggggcctaaagatggagtggctgca
aagagcagcaatccatggaaaaaggctcttgtccaggaatcagattcctcatggggagga
cagtggtccgcaggaagtgatgatgccacaaggacagtatggcgaggaaatgaagctgct
ctgttcttaacatctacaaatagatggaatgttctcgactcagattcatcaatgaacttg
atggcacctgaaccaaccgatgatcttaatataatagctcgcgtcgaaagcggatctgca
gtggaaccaacaaccgccggggtgagttcgtcggggattaagacggagacacttgaagag
gtggataactgggaagatgcttgcgagtaa
DBGET
integrated database retrieval system
