KEGG   Typha angustifolia (narrow-leaf cattail): 140760024
Entry
140760024         CDS       T11061                                 
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
  KO
K08337  ubiquitin-like modifier-activating enzyme ATG7
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    140760024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140760024
   04121 Ubiquitin system [BR:tang04121]
    140760024
   03029 Mitochondrial biogenesis [BR:tang03029]
    140760024
Membrane trafficking [BR:tang04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    140760024
   Atg8 conjugation proteins
    140760024
Ubiquitin system [BR:tang04121]
 Ubiquitin-activating enzymes (E1)
  UBL-activating enzymes
   140760024
Mitochondrial biogenesis [BR:tang03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    140760024
SSDB
Motif
Pfam: ATG7_N ThiF 2-Hacid_dh_C Shikimate_DH
Other DBs
NCBI-GeneID: 140760024
NCBI-ProteinID: XP_072952894
LinkDB
Position
5:join(4923824..4923986,4924062..4924258,4924330..4924521,4924643..4924697,4924799..4924893,4925111..4925300,4925411..4925516,4925626..4925770,4925843..4926001,4926072..4926260,4928857..4929075,4929191..4929306,4929509..4929665,4930389..4930577)
AA seq 723 aa
MAEISSTPSASTSSQARILQFAPFQSLVDDGFWRRLSSLKLDTLRIDQSPIAITGFYAPC
SHAQVSNRVTLLAESLPPNSDARHGNRNKCPVPGTLLNTNTLDSFRALDREALLKAEAKK
ILEDIFSGRVEEDPALLLRFLLISYADLKRWAFYYWFAFPAFVLDPPATVVNLRPASEAL
SSEEAASLSVACNEWRNSSMTADVPFFLVCISSNKRSTVRPLKDWEDCQDRDGKLLFGFY
DPCHLPNNPGWPLRNFLIFISLRWKIERVQFLCYREKHGLADMEFSLIGEALVSPPQAWR
DPQFVPKAVGWELKGGKMVSRFISLAESMDPERLATSAADLNLKLMRWRTLPSLDIDTLS
GVKCLLIGVGTLGCEVARILMAWGVRKITLVDSGRVSMSNPTRQSLYTFEDCLNGGELKA
VAAARNLKHILPAVEAEGIAMPIPMPGHPISAREEPSVLEDCKRLQALIASHDVIFLLTD
TRESRWLPTLLCANENKIAITAALGFDSYLVMRHGAGSLVSMARKTDDFGSRNEDSNVVA
TQMDSLSITDVDDGRRLGCYFCNDVVAPVDSISNRTLDQQCTVTRPGLAPIASALAVELL
VGILHHPDGIYAPGEIANSILSSSEQPLGILPHQIRGSLPQCALLTLIGHSSGSCTACSD
AVVSEYRRRGLEFVLQAINHPTYLEDLTGLTELMKSTSSIILDWDNDTDDDSDEGKQTVD
DNE
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcggagatctcgtcgacgccatctgcctcgacctcgtcccaagctcgaatcctccaa
ttcgctcctttccaaagcctcgtcgacgacggtttctggaggcgtctctcctctcttaag
ctcgacaccctccgcatcgaccaatcccccattgccatcaccggtttctacgcgccttgc
tcgcacgcccaagtctccaatcgcgtgacgcttctcgcggaatcgttgccgcccaattcc
gatgctcgtcacggtaatcggaacaagtgcccggttccggggactctcttgaacacgaat
actttggatagctttcgtgcgcttgatcgagaggctttgctgaaggcggaagcgaaaaag
attctggaggacattttctctggaagagtagaagaggatccggcgttgctcttgaggttt
cttcttatatcgtacgcggatttgaaaagatgggcattttattactggtttgcttttcct
gcatttgtgcttgatcctcctgcgacggtagttaatctgcggcccgcatctgaggcactc
agctcggaggaggcggcatctttatcagtggcatgtaatgaatggaggaattcaagcatg
acggcagatgttccattctttttggtttgtataagctcaaataagcgttccacagttagg
ccgttgaaggattgggaagactgccaagacagggatggaaagctactgtttggcttctat
gatccatgccaccttccaaataatcctggttggcctcttcggaacttccttattttcatt
agtttgagatggaagattgagagggtgcagtttttgtgctatcgagagaaacatggtttg
gctgacatggagttttcccttattggtgaagccttagtttcaccaccacaagcctggaga
gatccacagtttgttcctaaagctgttggatgggaattaaaaggagggaagatggtatca
aggtttataagccttgcagaatcgatggatccagagaggttggcgacatctgctgcggat
ctgaatttaaagctcatgagatggcgtacattgccatctctggatatagatactctatct
ggtgttaagtgtctactcataggtgtcggaacacttggatgcgaggttgctcgtattctt
atggcctggggtgttcgaaaaattacactagttgacagtggccgagtttctatgtctaat
cctaccagacaatcactatatactttcgaggattgccttaatggtggtgaattgaaagct
gtggctgcagcaaggaatctaaagcatattttaccagctgtggaagcagaaggtattgca
atgccaataccgatgcctgggcatcccatatctgcaagagaagaacctagcgtgcttgaa
gactgcaagcgtcttcaagcattgattgcatcccatgatgtgatcttcttgttgacagac
acacgggaaagcagatggcttccaacacttctttgtgcaaatgaaaacaagatagctatt
actgcagcattgggatttgacagttatcttgttatgcgtcatggggctggttctcttgtc
tcaatggcaagaaagactgatgacttcggctctagaaatgaagactcaaatgttgttgct
actcagatggatagcttgtctataacagatgtggatgatggtcgacggttagggtgttat
ttctgcaatgacgttgttgctcctgtagattcaatttcaaatcgcacgttggaccagcaa
tgcacagttacacggccaggccttgctccaattgcttctgcgcttgcagttgaactgttg
gtgggaatattacatcatcctgatgggatatatgctcctggtgagattgccaactccatt
ttgagtagcagtgagcaaccacttggtatattgcctcatcagattcgaggttctcttccc
cagtgtgctctattgacactcataggccattcatcaggaagctgtactgcttgttctgat
gctgtggtgtcagaatatagaaggagagggctggagtttgttctgcaagctattaatcat
ccaacttacctggaagatctaacaggactgacagaattaatgaagtcaacaagttctatt
atactggactgggacaatgatacagatgatgattctgatgaaggaaagcaaactgttgat
gacaatgaatga

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