KEGG   Typha angustifolia (narrow-leaf cattail): 140760069
Entry
140760069         CDS       T11061                                 
Name
(RefSeq) DNA repair and recombination protein RAD54
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    140760069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140760069
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     140760069
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 AAA_22 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 140760069
NCBI-ProteinID: XP_072952965
LinkDB
Position
5:join(6811728..6811954,6812246..6812626,6813106..6813192,6813319..6813559,6813702..6813827,6814071..6814127,6814204..6814290,6815142..6815237,6815354..6815404,6816391..6816465,6816583..6816669,6817180..6817271,6817356..6817485,6818684..6818803,6818882..6818995,6819079..6819162,6819260..6819334,6819409..6819467,6821238..6821442,6821531..6821629,6821957..6822304)
AA seq 946 aa
MIQMVSRRRDREDYEFDLSSDSTETAEGDEDYIEAVAAAEEEADREGDLQEEEPRDFDSP
PSDSERKSQNVAALVRGNLLVRRQPLIPRILSVSDGAEVARKPFKPPCRNGYRDHNEELA
RRLWARKRFVPWNSSRQPLAAITNILQTPTAATEDYSEKDQALPPGIEPLILWQPEVNDE
ENGDLSPIEVDPLLVRYLRPHQREGVQFMFNCVSGLSSADGINGCILADDMGLGKTLQSI
TLLYTLLRQGFDGKPIVKRAMIVTPTSLVSNWESEINKWLGGKVPLLSLCESTRADVLSG
IESFLKSCSPLQVLIISYETFRMHSAKFERTGSCDLLICDEAHRLKNDQTLTNRALAALP
CKQRILLSGTPMQNDLEEFFSMVNFTNPGVLGNAAHFRRYYEAPIICGREPMATVEERKL
SAERSAELSAKVNQFILRRTNALLSNHLPPKIIQVVCCKLTPLQLDLYNHFIKSKNVKRL
ISEEAKHSKILAYITALKKLCNHPKLIYDTIKSSSSEKSGFGDCMRFFSPELFSGRSGSW
TGGGMWVELSGKMHVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYVRLDG
ATSISKRQKLVNQFNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAA
RVWRDGQKKRVYIYRFLTTGTIEEKVYQRQMSKEGLQKVIQQDQVNIHAQGSFLSTENLR
DLFTFHEHIRSEIHENMKCTRCKKESLFAKDGTDCVTGVTDGKDSSIGDQQANQVADDIG
GFAEIAGCLQKLKSPEKQLGTPSEEDLGSWGHHSDPSTVPDAILKYSAGDEVTFVFTNQV
DGKLVPVESVPRSTAQQLNEPEGDRGKDENMIFSPQQIRSWSSSSNGTLDRTGSHLQSSS
SSGPSRSMRTSLNSTPALRKSNLSWGNQSSLKRTHPASEISDDDFT
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgatccaaatggtttcgagaagaagagatcgagaagactacgagttcgatctctcctcg
gactccactgagacggcggaaggagacgaggattacatcgaagccgtagcagcagcagaa
gaagaagccgatcgagaaggagacctgcaagaggaagagcctcgtgatttcgattcgccg
ccttctgatagcgagaggaagtcgcagaacgttgccgctcttgtgagggggaaccttctt
gtaagaaggcagccgcttattccacgaattctctcagtttctgatggagcagaagtggct
aggaagccatttaaacctccatgccgaaacggatatagggatcataatgaagaacttgct
cgacggttatgggcacgtaaaaggtttgtcccatggaattcttcgcggcagccattggct
gctataactaacattttacaaacgcctactgctgcaactgaggattactcagaaaaggat
caagctctcccacctgggattgagcctctcattctgtggcaacccgaggtaaatgatgaa
gaaaatggtgatctttctccaattgaagtagatcccttgcttgttcgttatcttcgacct
catcagagagaaggagttcagtttatgttcaactgtgtttctgggttgtccagtgctgat
ggtattaatggatgcattctagcagatgatatgggattgggaaagactctacaatcaatt
actttactttacacccttcttcgacagggatttgatggcaagccaattgtcaagagggct
atgattgtgactcctacaagtctagttagtaattgggagtctgagattaataagtggctt
gggggaaaagttccgcttctttctttgtgtgaaagcacacgtgcagacgttctctctggg
attgaaagtttcttaaaatcttgcagtcctttacaggtactcatcatatcttacgagaca
tttcggatgcattctgctaaatttgaaaggactggaagctgtgaccttctcatttgtgac
gaggctcataggctgaagaatgatcaaacactgacaaatagagcattggctgctcttcct
tgcaaacagcgtatcctgttgtcaggaacaccaatgcagaatgatctagaggaattcttt
tccatggtaaacttcacaaatccaggcgttttagggaatgcagcacatttccgcagatat
tatgaagcaccaataatttgtggaagagagcctatggcgacggtagaggaacgaaagctg
agtgctgagcgatctgcagagctaagtgcaaaagtaaatcaatttatattgaggcggaca
aatgctttgttgtcaaatcacctaccgccaaagatcattcaagttgtctgctgcaaattg
actcctttacaacttgatttgtataaccacttcataaaatccaaaaatgttaagcgtcta
atatcggaagaagcaaaacactccaaaattttagcatatattactgctctaaagaaattg
tgtaatcatcctaagcttatttatgacactataaagagcagtagttcagaaaaatctgga
ttcggtgattgcatgcgctttttctctccagaactattttctgggagatccggatcatgg
actggagggggaatgtgggtagaattatcaggtaaaatgcatgtcctagctcggttgctg
ggtcatcttcgtcagagaactgatgatcgtattgtccttgtatcaaattatacacagaca
ttagatctttttgctcaattatgccgggagagaagatacccatatgtcaggcttgatgga
gcaacatccattagtaaaaggcaaaagcttgttaaccaatttaatgatctatctaaagac
gaatttgtttttctcctaagcagcaaggctggtggttgtgggcttaatctaattggtgga
aatcgattggtgctatttgatcctgattggaaccctgccaatgataagcaggctgctgca
agagtctggagagatggtcaaaagaagcgagtttatatctataggttcttaaccacagga
actatcgaggaaaaggtctaccagcgtcaaatgtcaaaagaagggcttcaaaaagttatt
cagcaggatcaagtgaatattcatgcacagggaagttttctttctacggaaaacctacgt
gatcttttcacatttcatgagcatatcaggtctgagatacatgaaaacatgaagtgcaca
cgttgtaaaaaggaaagtttgtttgcaaaggatggcaccgattgtgttacaggggttact
gatggcaaagattcaagcataggagatcaacaggccaatcaagtggctgatgatattggt
ggatttgcggaaattgcaggatgcttgcagaagttaaaaagcccagagaaacagctcgga
acaccatccgaagaggatttaggaagttggggccatcattctgatccatcaacagtgcct
gatgctatacttaaatattcagctggtgatgaggtaacatttgttttcaccaatcaagta
gatgggaagcttgttccagtcgaatcagtgccaagatcaaccgctcagcagttgaatgag
ccagaaggagaccgaggaaaagatgagaacatgattttctcacctcagcaaattaggtcg
tggtcttcatcatcaaatggaactttagataggacgggttctcatttgcaaagttcatcc
tccagtggtccttctagatcaatgagaacatcattgaatagcactcctgccctgaggaaa
tccaacctttcttggggcaatcaatcttcgcttaaaagaacgcatcctgcttctgaaata
tctgatgatgattttacatga

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