KEGG   Typha angustifolia (narrow-leaf cattail): 140760101
Entry
140760101         CDS       T11061                                 
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3
  KO
K03255  protein TIF31
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tang03012]
    140760101
Translation factors [BR:tang03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    140760101
SSDB
Motif
Pfam: eIF3_p135 TPR_12 TPR_10 TPR_NPHP3 CLU_N TPR_2 TPR_9 TPR_MalT TPR_8 PAM2 TPR_16 CLU TPR_1 ANAPC3
Other DBs
NCBI-GeneID: 140760101
NCBI-ProteinID: XP_072953015
LinkDB
Position
5:join(4356873..4356942,4357079..4357140,4357245..4357337,4357434..4357506,4360351..4360689,4360789..4360847,4361476..4361607,4361855..4361896,4362004..4362522,4362619..4362773,4363129..4363633,4365112..4365174,4365264..4365365,4365466..4365783,4365862..4365954,4366047..4366148,4366249..4366353,4366771..4366904,4369686..4369869,4370354..4370485,4370571..4370683,4370762..4370843,4374409..4376100)
AA seq 1722 aa
MAPKAGRGKGNRGKGEKKKKEEKVVPSVIDVTVVTPYDSQVTLKGISTDRILDVRKLLGS
HVETCHLTNYSLSHVVRGHRLTDGVEIVTLKPSVLRIVEEDYSTEEQAIAHVRRLLDIVA
STTVFGKHKDGVGKSRKHNSSSPPTPTTPTTATVKTAANGRSPRGSSSPVPGDPGSIPAI
SEKFDMAAIHPPPKLADFYDFFSFSHLTSPIQFIRRREIDGKRREGDYFEIEVKVCNGKI
INVTSSAQGFCTTGKQHVMRHSLVDLLQQLSSAFANAYESLMKAFVEHNKFGNLPYGFRA
NTWLVPPIFVESSSKHPSLPIEDENWGGNGGGHGRDGKYDQRRWATEFSILARMPSKTEE
ERLVRDRKAFLLHSLFVDTAIFKAVSAIRCLIDSNPKSTTSRGIIHEEQTGDLCIVIKRD
PADASLKQDEKVDGSALLNMCPKDVSLRNLLKGLTADESAVVKDTPTLGAVILKHCGYTA
TVKVSGHIRSTKNDIQHIDVDDQPDGGSNALNINSLRIVLSKFSNMDRHEGNQCLSGCHT
VSAIRNLVRRVLSDSLIKLEKESSTTDRSIRWELGACWLQDLQKKETPAAEEPKGKSEDP
QVKSVVKGLGENFEQLRKIKKRTDVDSRSEKEETVSSNILLTVAPDLENLKQFESNEDTE
VRKFLKEDAFSRLKDSETGLHQKSADELIKMAHKFYDDVALPKLVADFASLELSPVDGRT
LTDFMHTRGLNMSSLGHVVELAEKQPHIQSLCIHEMVIRAFKYIIRAVVSAVENLSELSS
AIAETLNILLGSSKEENDNQDYLTEQTLKKKWVENFISKRFSWRIKDEFQHLRKFVILRG
LCNKVGLELVARDYDMNSPNPFEKSDIISMVPVYKHKACSSADGRNLLESSKTALDKGKL
DDAVSYGTKALSKLIAVCGPYNRMTANAYSLLAVVLYHTGDFDQATIYQQKALDINEREL
GLDHPETMKSYGDLSVFYYRLQHIELALKYVNRALYLLQFSCGLSHPNSAATYINVAMME
EGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSMMEAYSLSVQHEQTTLQ
ILQAKLGSEDLRTQDAAAWLEYFESKAVEQQEAARRGIPKPDSSIASKGHLSVSDLLDYI
SPDLDAKERYAERKHRRAKNNSRSNQDESIRNVDDSQHDVESPNSQTVIKKQTVARIPEE
PLQEQVKKINVLTTNELQQAYLISPEEFSDEGWQEATLKGRSGHTRRKFGWRRPDLAKLN
IDSSDNTHYVSNSYKRKNASPALRGNIIEPRIPSNDSAPGKGLKVVYVTGEKDSNNLQTR
TSDLYAKSEQSMKVSGSSWLTTIASKSISYKEVAVSPPGTVLKPILEQQEESKEENPDSE
EVADLPETSEDEEKKVKEVELDKEITSDDGEKEIHSSQVEMVSTMEKSPESNENQQPSGP
KKDTTNGSKLSASAPPFSPGSLLSMPHPYNTAAIYDTRVAHSTSPSQRMEITSPHSVDTR
VPRGPRSTLYYRSGHTFRRKQGYSNSQNTVARSSPSPSIMNPHAAEFVPGKLLQQPDDTN
KDPDAQNPVTNLSSEVNLPILTKEVEADTVLTEQKRQDNKVSDGGKARESKGKGGTQNSY
KTELARQILLNFIVRSVHDSLDTSVETQESTKQNGPESKASREQSGNPMKNESGDQASTD
MHKGNKDTEGFTVVSKRRRSKQQFMSAVSGLYSQQSICTTVS
NT seq 5169 nt   +upstreamnt  +downstreamnt
atggctccgaaggctggccgtggcaaaggaaacagaggcaaaggagagaagaagaagaaa
gaggagaaagttgttccgagtgtaatcgatgtcacagtggtcaccccctatgactcccag
gtgacactcaagggaatatctactgataggattctggatgtgaggaagttgttgggctcc
catgtagagacttgccacctcacaaattattcactgtctcatgtggtccgtgggcaccgg
ttaaccgacggcgtggaaatcgtgactctaaaaccatcggttctgagaatagtggaagag
gactactcgacggaggagcaggcgatcgcgcacgtgcggaggctcctagatatcgtggcg
tccaccacggtattcggcaagcacaaagatggagtcggcaaatcgcggaagcacaattcg
tcttctcctcctacccctactacgcccacaacagctaccgtcaagactgcagcaaatggc
agatcgccacgcgggtcttcttctccggtccccggagatcccggctcgatccccgctatc
tccgagaagttcgacatggcggccatccacccacctcccaaacttgccgacttctacgac
ttcttctccttctcccacctgacctctcctatccaatttatacggaggcgtgagattgat
ggaaagaggcgggaaggagattattttgaaattgaggttaaagtttgtaatgggaagatt
ataaatgtaacatcctctgcccaaggattttgtactaccgggaaacaacatgttatgagg
cactcccttgttgatcttctgcagcagctcagcagtgcatttgcaaatgcttacgagtcc
ttaatgaaggcttttgttgaacataataagtttggtaatcttccatatggattccgtgcc
aatacatggcttgtccctcctatatttgttgaatcttcttcaaagcacccctcactgcca
atagaagacgagaattggggagggaatggaggtggtcatggacgagatggtaaatatgat
caacgacggtgggcaacagagttttcaattttggcaagaatgccatctaaaactgaagag
gagagactcgtaagagacaggaaggccttcttactgcacagtctttttgtggatacagca
atatttaaggctgtttcagcaatacgttgtctcatcgactccaatccgaagtcaactact
tcacgaggtattattcatgaagaacaaacaggtgacttgtgcatagttattaaaagggat
ccggcagatgccagcttgaagcaggacgagaaagtcgatgggagtgcattacttaatatg
tgccctaaggatgtctccctaagaaatcttctcaaaggattgactgctgatgagagtgct
gttgttaaagacacacccacattaggagctgtcattcttaagcattgtggatatactgcc
actgttaaggtttcaggacatataaggagcactaaaaatgacattcagcacattgatgta
gatgatcaaccagatggaggttccaatgccttgaacatcaacagcttaagaattgtcctc
agcaagttttccaatatggatcgacatgagggaaatcagtgcctgtctggctgtcatact
gttagtgcaatcaggaatttagtgcgcagagtacttagtgatagcttgatcaagctagag
aaagaatctagcacgaccgacaggtctatcagatgggaacttggtgcttgctggctgcaa
gacttacagaaaaaggagacgcctgcagcagaggagcctaaaggaaagagtgaagatcct
caggttaaatcagttgttaaaggtcttggagaaaattttgagcagttacggaaaataaaa
aagagaacagatgtggatagcaggtctgaaaaggaagagaccgtgagtagcaacatactt
ctaacagttgcacctgacttagagaatctaaaacagtttgaatccaatgaagatactgaa
gtaaggaaatttcttaaggaagatgccttttcccgtttgaaagattctgagactggtctt
catcagaagtcagcggatgagctcatcaagatggcacataaattttatgatgatgttgca
cttccgaagctggtagcagattttgcatcacttgagctttctccagttgacggaagaacc
ctaactgattttatgcatacacggggacttaatatgtcctccttagggcacgtggttgag
cttgcagagaagcaaccacatatacaatcactatgcattcatgagatggttattcgagct
ttcaaatacattatacgtgctgttgtctcagcagtcgagaatttatcagagttgtcatct
gctattgccgaaacattgaacatcttgcttggttcatcaaaagaggaaaatgataaccaa
gattatcttacagaacaaactcttaagaagaagtgggttgaaaactttatttcaaaaaga
ttttcttggaggataaaagatgaatttcagcacctacggaagtttgtaattctcagagga
ctttgcaataaggttggactggaattggttgctcgagactatgacatgaatagccctaac
ccatttgagaaatctgatattatcagcatggttcctgtttacaaacacaaggcctgttcc
tctgcagatggtcggaacttactggaatcatcaaagacagcactggataaaggaaagcta
gatgatgctgtcagttatggcacaaaggcattgtcgaaattgatagcggtttgtgggcca
tataatagaatgactgctaatgcatacagtctgctggcagtagttctttatcatactgga
gattttgatcaggctactatatatcagcaaaaggctcttgatatcaatgaaagggagctt
ggccttgaccatcctgaaacaatgaaaagttatggggatctttctgttttttactatcgg
ctccaacacattgaattggctttgaagtatgtgaatcgtgcactctatcttctacagttc
tcatgtggactgtcacacccaaattctgctgcaacctatataaatgtggcaatgatggaa
gagggcatgggtaatgttcatgttgcactcagatacctacatgaggcacttaagtgcaac
aagagattgctgggagctgatcacatacagactgctgcaagctaccatgccattgctata
gctctttctatgatggaagcatactccctaagtgtgcaacatgaacaaacgactttacag
atacttcaggcaaaacttggatctgaggatcttcgtactcaggatgcagctgcgtggctc
gaatattttgagtcaaaagctgtagagcagcaagaggctgctcgaagaggcattccaaag
cctgattcatctattgcaagcaaaggtcacctcagtgtatcagatctccttgactacata
agcccagatctagatgcaaaggagagatatgcagaaagaaaacatcggcgtgcaaagaat
aatagcagatctaatcaagacgaatccatcagaaatgtagatgattcccagcatgatgtg
gaatccccaaacagtcaaacagtaataaagaaacagactgttgcaagaatacctgaagag
cccctacaagaacaggttaaaaaaatcaatgtgttaactaccaatgagttacaacaagca
tatttaatatcccctgaagaattttctgatgaagggtggcaagaggccacattaaaagga
cgctctggacatacgcgaagaaaatttggctggagaagaccagatcttgctaaattaaat
atcgatagctcggataatacacattatgtgagtaatagctacaaaaggaaaaatgcatca
cctgcacttagaggcaacataatagaaccaagaatcccttctaatgattctgcacctggc
aaaggtctgaaggttgtatacgtaacgggagaaaaagactcaaataacttgcagaccagg
acctctgatttgtacgctaaatcagaacaaagcatgaaagtgtctggttccagttggctc
accactattgcatcaaagtcgatatcatacaaagaagtagcagtatctcctcctggcaca
gtcttgaagccaattttggagcaacaagaagaaagtaaggaggagaatcctgattctgag
gaagtcgctgatctgccggagacatcagaagatgaagagaaaaaagtaaaagaagtagaa
ttggacaaggaaataacaagtgatgatggtgagaaagagattcactcaagtcaagtggag
atggtcagtacaatggaaaagtctcctgagagcaatgagaaccaacaaccatcaggacca
aagaaagacacaacaaatggaagcaaactttcagcttcagctcctccatttagtccaggc
tcactgttgtctatgcctcatccatacaatacggcggcaatttatgacacgagagttgcc
cattcaacatccccaagccagagaatggaaatcacctcccctcactctgttgatactaga
gtacctcggggtcctaggtcaactttgtattatcgtagtggtcataccttccgtagaaag
cagggttactcaaacagccaaaacactgttgctaggagtagtcccagccccagcatcatg
aatcctcatgctgctgagtttgtgcctgggaagcttttgcaacaaccagatgataccaac
aaagatccagatgctcaaaatcctgtaactaatttgagctcagaggtaaatctgccaatc
cttacaaaggaggtggaagctgacacagttcttacagaacagaaaagacaagataataaa
gttagtgatggaggtaaagctagggaaagcaaaggtaaaggtggcacacaaaattcttac
aagacagagcttgctaggcagattctgcttaacttcatagtgaggtctgtccatgatagt
ttggacacttcagttgaaactcaggaaagtacaaaacaaaatggaccagaaagcaaagca
agtagagagcagagtggcaacccaatgaagaatgaatctggtgaccaagcttcaacagac
atgcataaaggaaacaaggatacagaaggatttacagtagtttcaaagagaagaagaagc
aaacagcaattcatgagtgctgttagtggattgtatagtcagcagtccatatgcacgaca
gtcagctga

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