KEGG   Typha angustifolia (narrow-leaf cattail): 140760163
Entry
140760163         CDS       T11061                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140760163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140760163
Enzymes [BR:tang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140760163
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     140760163
SSDB
Other DBs
NCBI-GeneID: 140760163
NCBI-ProteinID: XP_072953098
LinkDB
Position
5:join(1217165..1217248,1221132..1221258,1221362..1221477,1229311..1229367,1230465..1230632,1237933..1238091,1238172..1238327,1238462..1240198,1240322..1240497,1240911..1240986,1242505..1242632,1247050..1247219,1250145..1250419,1250946..1251119,1251217..1251357,1251506..1252902,1254337..1254445,1254604..1254837)
AA seq 1827 aa
MEEDVASPLVLDGSIRSIKFSAATDAEICTYSISECPISHPSQLTNPFLGLPLEFGKCES
CGTAEQGQCEGHFGYIQLPIPVYHPSHVSELKHILSLVCLKCLRMKKGKVKQSLGKDSIS
TTSCFYCRDLPPLSVKEVKTTDGALFLELRAPSRKKLRDGFWNFLDRFGCHYGDSSGRPL
LPLEVLNILKEIPEETRRRLAAKGYFPQTGYIMQHLPVPPNCLYSPEISDGKTIMSYDIS
VTLLKRILNKIELIKRSRSGSPNFESHEVESNDLQSSIAQYMHLRGTTKGPQEITRRFAI
GTTEANECSTKQWLDKIRTLFIRKGSGFSSRSVITGDAYIGINVIGLPSEIAKKITFEER
VTEYNMNRLQKVVDDRLCVTYKDGSSTYAISVGSKGHTFLKVGQIINRVIMDGDVVFINR
PPSTHKHSLQAFYVYIHDDHTVKINPQICAPLGADFDGDCVHIFYPQSLAAKAEVLELFS
VENQLRSSHTGKLNLQIVHDSLLSLKIMSARTFLNKPTAQQLVMFVSPVLPPPAILKGHK
SGSFWTVTQILESAFPTFLDCFGEKHLIRNSEIVKLDFDRDFMQESFTEILSSIFIIKGP
KEALNFLNVLQPLLMEILFLEGFTVSLKDFDVPKDAIEEIQKNLQESSYILDKSSSFQNQ
SELRVENHLRSIKQPIVDFILKFSSVGYLIDAKSDSAIMKVVQQLGFLGLQLYSQGKFYS
RGLVEDCLSSYVNKYTLGRGVYPSEAYGLIKNSFYHGLNPYEELVHSISCREVMVRSSRG
LTEPGTLFKNLMAILRDVIICYDGTVRNICNNSILQFEYGEDETDDLLGLSPPGEPVGVL
AATAISNPAYKAVLDSSQSNNSSWELMKEILLTKSSYKNDFNDRRITLYLNDCYCGKRFC
KEKAAIAVQSFVKRVILQDCTTEFSIQYQKEIPIRGSSETTSGLVGHIHLDQMQLELLKK
STDEILQKCQEVILRHGKKKGQLSHLFRRITLTASECCSTQKPNSDILSHVPCLQFSHCD
GNATPCFESFERAVHVLANTICPILLDTIIKGDSRIQEAKIVWVGPDSTSWVRNSCRTLK
GELAVELVVEKGVAQRNGDAWRTAMDACLPVMHLIDIRRSSPYGVQQIRELLGISCAFDQ
TVQRLSRSIKTVAKGVLKDHLILVASSMACTGNVNGFNTGGFRALYRSLKVQVPFTEATL
FTPMKCFERAAEKCHSDSLDCVVSSCSWGKRVAIGTGSHFQILWDKKQMANEKDTGKGLY
DFLSLVRTSGQRKSNGACFEDFDDLEEENDFEECLSPEFDGGFGKPTFEDNIEDDYNIQK
SIILGDEKVGSWEKLSVSGVETNNWGGWGNGEPTDSAKSGLISAKSREPTDSWNNKNWNK
HSVTGMDTNNWGGWGNGEPIDSGKSCLLAEKSGEPADSGNFKTVNSRSGVLSSWSSTKVQ
RNTIESENSTKEIGQYKPCDKMDVQKESNSINQPDTSENWKSDVKKNAWFSTSQANTVID
THSWNEVENDMVEQHDKSPVWNRNSGSPKTEPGDSQVLGSEAWGNESSSRSHNVKLADGT
CNSKDEQTWTEVIESPSQQMWDSNVTNSSYEMGSQWNANASSTSNNWNSKNSGIPDNERL
SNTNPWNENRGSDLGNQAWKSDAWGSSNSANWRGHKNPPGRPQRKNDDRKGWNPNLSLTS
TRRRLESLTTEEEKILVEVEPIMQNIKRILRDSSDGDKLSQEDVNFIRDNVFEYHPDKQA
KVVEKIDYIMVDKHKVFQETRCFYVVSSDGSSADFSYKKCMENFVKQNFPEHGESFNRKY
FRKPNPAPNNGDWGKPNPAPGNGDGGQ
NT seq 5484 nt   +upstreamnt  +downstreamnt
atggaggaggatgtcgcatctcctcttgtgttggatgggtcgattaggagcatcaagttc
agcgccgcgaccgacgcggaaatttgtacatactccataagtgaatgcccaatttcgcat
ccaagccagttaacaaatcctttccttggtttgccgttggaatttgggaaatgtgaatct
tgtggaactgctgaacaagggcaatgcgaaggtcattttgggtatatacagttgcccata
cctgtatatcatccatcccatgtcagtgaattgaagcatattttgagcttggtttgtttg
aagtgcttgcgaatgaagaagggaaaggtcaaacaaagccttggaaaagacagcatctca
actacttcatgtttctattgtcgggatctaccaccattatctgttaaagaggtgaagaca
acagatggcgctcttttcttagagctgagagcaccatctaggaaaaaattacgtgatggc
ttctggaactttttagatcgcttcggctgtcattatggtgactcctctggtcgccccttg
cttccccttgaggtccttaatattttgaaagagattccagaagaaacgaggagaaggctt
gctgcaaaaggatattttcctcagactgggtatatcatgcagcatcttcctgttcctcct
aattgcttatattcgccagaaatttcagatggaaaaactataatgtcctatgatatttct
gttacattgcttaaaagaattctcaacaagattgagctgatcaagaggtcaaggtctggc
tctccaaattttgagtcccatgaagtcgagtccaatgacctacagtcatctattgcacaa
tatatgcatctaagaggaaccacaaagggacctcaagagataaccagaagatttgccatt
ggtactactgaggcaaatgaatgttctaccaaacagtggcttgacaagataagaacattg
tttatcagaaaggggtcaggtttctcttcacgcagtgtgattactggagatgcatatata
ggaattaatgtaattggcctaccatcagaaatagcaaaaaaaatcacatttgaagaacga
gtgacagaatataacatgaatcgcttacaaaaagtggtggatgaccgactttgcgtaaca
tataaagatggttcttcaacatatgcaatttctgtgggctcaaaggggcacacttttctt
aaagttggtcagatcatcaaccgtgtaattatggatggggacgtagttttcatcaataga
ccaccgagtacccataagcactcactacaagcattttatgtatatattcatgatgatcac
actgtaaagatcaacccacaaatttgtgctcctcttggagctgattttgatggggactgt
gttcatatattttatccacagtcccttgcggccaaggcagaggttttggagttattcagt
gttgaaaaccaactgcgtagttcacatactgggaagttaaacctccagatagttcatgat
tcactgttgtcattgaagatcatgtctgcaagaacctttttaaacaagccaacagcacaa
cagttggtaatgtttgtatctccagtcctcccaccacctgccattttgaagggtcataaa
tcaggttcattttggactgttactcaaatactggagagtgctttcccaacctttcttgat
tgttttggggagaagcatttgataagaaatagtgagatagtcaaactagattttgatagg
gattttatgcaggaatcttttacagagatcctttcttccatttttatcattaagggtcca
aaggaggctttaaactttttgaatgtgctgcagcctctattaatggagatattgtttttg
gaaggttttactgtaagtttaaaagattttgatgttccaaaggatgctattgaggaaatt
caaaaaaatctccaggaaagctcatacatacttgataaatcatcatcttttcagaatcaa
tcagagttacgagttgaaaaccaccttagaagtatcaaacagcccattgtcgatttcatc
ctgaagttttcttctgtgggttatttgatcgatgcaaaaagtgattctgctattatgaaa
gttgtccaacagcttgggttcttgggccttcaactgtattcccaaggaaagttctattca
agaggcttggttgaggattgtttatcaagctatgttaataaatacacgctgggtagaggg
gtttatccgtccgaagcatatggcctaattaagaattctttttatcatggtttaaatccc
tatgaggagctggtccattcaatctcttgtagagaagttatggttcgatcatctagaggg
ctaacagaacctggtactctttttaaaaacttaatggcaattcttcgtgatgttatcata
tgctacgatggcactgtcagaaacatatgcaacaattcaattcttcagtttgaatatgga
gaggatgaaacagacgacctccttggtctatcacctcctggagaacctgttggagtctta
gctgccactgcaatatcaaaccctgcatataaagcagtattagattcctctcaaagcaac
aactcttcttgggagttaatgaaggagatattgcttacaaaatcaagttacaaaaatgat
ttcaacgatcgaaggataactctgtatttgaacgattgctactgcggtaaaagattttgc
aaggaaaaggcagcaattgctgttcaaagttttgtgaaaagagtcatattgcaggactgc
accacagagttttccattcagtatcaaaaggaaataccaatacgtggaagttctgaaaca
acttcgggtcttgttggccatattcaccttgatcagatgcaattagaattattaaagaaa
agtacagatgagattcttcagaagtgtcaagaagttattcttagacatggaaagaagaaa
ggccagctcagccacctatttaggagaattactttgactgctagtgaatgttgcagcacc
cagaagccaaatagtgatatactctctcatgttccatgcctgcagttctctcactgtgac
gggaatgctactccatgttttgaatcttttgagagagcagtccatgttttggccaatact
atctgtcctattctattggatacaatcattaagggcgattcccgaattcaggaggctaag
attgtgtgggtcggaccagattcaacttcctgggtgagaaattcatgcagaacattgaaa
ggggagctagctgttgaacttgtggttgagaagggtgtggctcaacgtaatggtgatgca
tggagaacagcaatggatgcttgcttacctgtgatgcatctcattgatattaggagatct
tctccttacggtgtccaacaaattcgagaacttcttggcatctcttgtgcctttgaccaa
acggttcagcgtttgtcaagatcaatcaagacggttgctaaaggtgttctcaaagatcac
ctaattcttgttgcaagtagcatggcatgtacgggtaatgtaaatggttttaatactggt
ggttttcgagcactgtatcgttcattaaaagtccaagtaccatttacggaggccacatta
tttacacctatgaaatgctttgaaagagctgctgaaaaatgtcattctgattcactagac
tgtgttgtttcatcgtgttcatggggcaaacgcgtggcaatcggtacgggctcacatttc
cagatcctttgggacaaaaagcagatggcaaatgaaaaagacactggaaagggcttgtat
gacttcttgtctttggtaaggacatctggccaaagaaagtcaaatggtgcatgttttgaa
gattttgatgaccttgaggaggagaatgattttgaagaatgcttatcccctgaatttgat
ggtggttttggtaagcccacatttgaggacaatattgaagatgactacaatattcagaaa
agtattatcttgggagatgaaaaagttggtagctgggaaaaactctcagtttctggtgtt
gagacaaataattggggaggatggggaaatggagagccaactgactctgcgaagtctgga
ttaatatcagccaaatctagagagccaactgattcatggaacaataaaaattggaataaa
cattcagtcactggtatggatacaaataattggggaggttggggaaatggagagccaatt
gactcagggaagtcctgtttgttagcggagaaatctggagaaccagctgattcagggaac
ttcaaaacagtaaatagcagatctggagttttgtctagttggagttctacaaaagtgcaa
cgaaataccattgaatctgaaaattcaacaaaagagattggacaatataagccttgtgat
aagatggatgtccagaaagaatcaaactctataaaccagcctgacacttcggagaactgg
aaatctgacgtgaagaaaaatgcctggttttctacaagtcaagctaatacagtgattgac
acacattcttggaatgaggtggaaaatgatatggtggagcagcatgataaatcaccagtg
tggaacagaaattctggaagccctaaaactgagccaggtgattcccaagttttgggatca
gaagcctggggcaatgaaagttctagtagatcccataatgtgaagttggcagatggtaca
tgcaatagtaaggatgaacagacatggactgaagtgatagaatcaccaagtcaacaaatg
tgggatagtaatgtaacaaatagttcatacgaaatgggtagtcagtggaatgcaaatgca
tcttccacatcaaataattggaatagtaagaactctggtattccagataatgaaagattg
tcaaatacaaacccatggaatgagaacagaggatctgatcttggaaatcaagcatggaaa
tctgatgcttggggttcttcaaattctgctaactggagaggacataaaaatcctcctggc
aggccgcagaggaagaatgatgaccggaaaggttggaatcctaatttgagcctcacgtcc
acaagacgacgattagaatcattaacaactgaggaagaaaagatacttgttgaagtcgag
ccaatcatgcagaatattaaaagaattctgcgtgattcgagtgacggtgacaagctctcc
caggaagatgtaaatttcattagggataatgtttttgagtatcatcccgataaacaagcg
aaggttgttgagaagattgactacataatggtcgacaagcacaaagtttttcaggaaaca
aggtgcttttatgtggtctcttctgatggatctagtgctgatttctcctataagaagtgc
atggagaatttcgtcaagcagaacttcccagagcatggggagtcctttaacaggaagtac
ttcagaaagccaaatccagcacccaacaatggtgattgggggaagcccaatcctgcacct
ggtaatggtgatgggggccaatag

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