KEGG   Typha angustifolia (narrow-leaf cattail): 140760249
Entry
140760249         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tang03009]
    140760249
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    140760249
  Pre-60S particles
   Other pre-60S particles
    140760249
SSDB
Motif
Pfam: HEAT_RRP12_N RRP12_HEAT INTS1_R4
Other DBs
NCBI-GeneID: 140760249
NCBI-ProteinID: XP_072953225
LinkDB
Position
5:complement(join(5931700..5932276,5932440..5932592,5933951..5934027,5934109..5934210,5934940..5935068,5935197..5935361,5935525..5935638,5936611..5936682,5936782..5936916,5936984..5937040,5937124..5937217,5937497..5937669,5940173..5940391,5940489..5940680,5940753..5940950,5941742..5941824,5943436..5943690,5943783..5944314,5944891..5945388))
AA seq 1274 aa
MDELDMEVESGDLSADFSAGILSRLQNSSREDHQHMCAAIGAMAQALKDQGMPLTPVAYF
SATTASLDRLSRDPAAAASDPVTASLLSFLSTSLPRVPVAVLRSKGASVAQSVVHILGLQ
ALPDGGVKAGLKCLAHLIVVGDKSNWESLSPFYGVVLSFATDHRPKVRKQSHSCLHDILQ
SFQKLAVLVLASERITTIFERFLLLAGGSTSANAGKKEEGTKGAIEVIYILNALKDCLPL
MAVKSTNIILKYFKSLLDLRQPVVTKIILEVLQSLCNKSSSEVNPELLLDLLCSLALSFS
SEEKSADEMAAAARLLHVGMKKICNLNKQICVVKLPLIFNALGDMLASEHEEAASAAMEA
LKGLMHSCIDKRLAEQGVDQIKARQKGVKSGPTVIEKICAVLEGFLGVRYNAVWDLSFHI
LSSAFDILGESSCYLMAEALKSLADLHNEDLPYRKQLIECLGSAIAAMGPKEFLNVLHVQ
SICEANAWLLPILKQHIVGASLSFFLTDILKMISSLQEDVTKLVREDKPYSAKRVEGFAY
SLWSLLPSFCKYPCDTASTFEDLQNVLCDVLRKEPNLHGVICSSLQILIQQNKNIISESK
EKIEIEDELSNSERRAKDRYTKEVAEENLKAMCAFSPKFLKILYSILLEASKDTGGCLQS
TIREFASVSDKKLVKKFFVDAMKELLDATHKAINAKQHDSSSAMQIDIQSNTRITKRALL
LDFAVSLLPGLGAKEIDLLFSAIKPAIQDDEGLIQKKAYKILSIVMKNSDQFLERNLDAM
LELLVSSLPSCLFPAKRHRLECLYYIIVYISKDSFEQRKREIISSFLTEILLALKEANKK
TRNRAYDLLVEIGHACEEGKYGERKENLQQLFNMVATGVLVGQTPHMISAAIKGLARLTY
EFSDLIGVAYKLLPSAFLLLQRKNREIVKANLGFIKVLVAKSKADGLQEHLKGIVEGLLK
WQDDTKNHFKAKIKLLLEMLVRKCGLDAVKAVMPEEHIKLLTNIRKIKERKERKAKFSDN
EESLTSRTSISRQSRWNDTRIFSDFGDDDGDNDSDAEFGVAKLFSGQRTDASSRPGSKAL
SLRSTRKRHPAKSLSDDSIDQRNGDPLDLLDRQTMRLALQSSSKKAFYDEPEIDPEGRLI
VREDDDKRKRKKSLTSDLDSDTRSLLGSRSLVSSSTVAQKRRRTSDSGWAYTGKEYTSKK
AGGDVKKKDKLEPYAYWPLDRKLLNRRADRKAVARKGMSSIMKFAKKLEGKSASRALSVK
DTRLKKKQNGSKKR
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggatgaactagacatggaagtcgaatccggagacctcagcgccgacttctcggcggga
atcctttcccggctccagaactcctccagggaggaccaccagcacatgtgcgccgccatc
ggcgccatggcccaagcgctcaaggaccaggggatgccccttactccggtcgcctacttc
agcgccaccaccgcctccctcgatcgtctctctcgtgaccccgccgccgctgcctcggat
cccgtcacagcttccctcctatccttcctctccacctccctccctagagtccctgttgcg
gtcttgagaagcaagggagcttcggttgctcagtcggtcgttcacattctaggattgcag
gctcttccggatggcggcgtgaaggcagggttgaagtgccttgctcatctcatcgtggtt
ggggataagtcgaattgggagagtttgtcccctttttatggagttgttctaagctttgcc
acagatcaccggccaaaggtgagaaagcagtcccactcatgtctgcatgatatacttcag
agtttccaaaagttggcagttttggtgctggcaagcgaaagaatcacaacaatttttgag
cggtttcttttgcttgctggtggatccacttctgcaaatgcaggtaaaaaggaagaagga
acgaaaggagctattgaagttatatatatattaaatgctctgaaggattgtcttcctctt
atggcggtaaaatctactaatatcatcttgaagtacttcaaatctctattggatttgcgt
caacctgtagtgacaaagattatattggaggttttgcaatctctttgtaacaaatcttct
tcggaggttaatcctgaactattgttggatctcttgtgctcattagcactgtctttctct
tctgaggagaaatcagcagatgaaatggcagcagctgcacgtttattacatgtcggtatg
aaaaagatttgcaatctaaacaagcaaatatgcgttgtgaagcttccgctcatattcaat
gcccttggagacatgttagcaagtgagcacgaggaagcagcatctgctgctatggaagct
ttgaagggtttaatgcattcttgcattgataaaaggttggctgaacagggtgtcgatcag
atcaaggctagacaaaaaggggtaaagtctgggcctacagtcatcgaaaagatttgtgcg
gtacttgaagggtttctgggcgttcgctataatgctgtttgggacttatcgtttcacatt
ctatcatccgcttttgatattctaggggagtcttcatgctatctaatggcagaagcactt
aagagtcttgcagatttacacaatgaagatttaccttacagaaagcagcttattgaatgt
cttgggtcagcaattgcagcaatggggcctaaggaatttttaaatgttttacatgttcaa
agtatctgtgaagccaatgcatggcttcttcctatattaaagcaacacatagttggtgct
agtttaagttttttcttgacagatattttgaaaatgattagcagcttacaagaagatgtc
actaagcttgtaagggaagataagccttactcagctaagagagtcgaaggcttcgcatat
tcactatggtctttgttgccttccttctgcaagtatccttgtgacacagcaagtaccttt
gaagatcttcagaatgtattatgtgatgttctccgtaaagagcccaacttgcatggggta
atctgctctagtcttcagattctaattcagcagaacaagaatataatttctgaatctaaa
gagaaaattgagattgaggatgaactaagcaattctgaaagaagagcgaaggaccgctat
accaaagaagtagcagaagaaaatttgaaagctatgtgtgctttctctccaaagtttttg
aaaattctatactctatattattggaagcttcaaaagacactggtggctgcttgcagtct
accatccgtgagtttgcttccgtatcagacaagaagttagttaagaaattctttgttgat
gccatgaaagagctattggatgcgactcataaagcaattaatgccaagcaacatgacagt
tccagtgcaatgcagatagacattcagtccaacacaagaataacaaaaagggccctctta
ttggactttgcagtttcccttcttccaggtctcggtgcaaaagagattgatttattgttc
agtgctattaagcctgcaatccaggatgacgaaggtttgatccaaaaaaaggcatataaa
attctttcaattgtaatgaagaattctgatcaattcctcgaaaggaacttggatgcaatg
cttgaattgttggtttcatcactcccatcatgtttgtttccagcaaaacggcatcgactg
gaatgtttatattacataattgtttacatttcaaaggattcatttgaacaaagaaagagg
gagattattagctcctttctcactgaaattcttcttgctttgaaggaggctaacaagaaa
acaagaaatagagcttatgacttgcttgttgaaattggccatgcatgtgaagaaggaaaa
tatggcgagaggaaagagaacttgcagcagctatttaacatggttgctactggagttttg
gttggtcaaactccgcacatgattagtgctgctataaaagggttagctcgcttgacctat
gagttttctgatctcattggtgtagcttacaagttgctcccgtcggcctttctcctccta
caaaggaagaatcgtgagatagtcaaggctaatctaggtttcataaaagttctagtggca
aaatccaaagctgatgggttgcaggagcacttgaagggaattgttgagggcttgttgaag
tggcaagatgacacaaaaaatcattttaaggccaagattaagttactcctcgagatgctt
gtgaggaaatgtggcttagatgctgtgaaagccgtgatgcctgaagagcatataaagctg
ctaaccaatatacgcaagattaaagaacgcaaggaacggaaagccaaattttcggataat
gaagagtcacttacctcacgaacaagtatctcaaggcagagtagatggaatgatactcgt
atattttctgattttggagacgatgatggggataatgacagtgatgctgaatttggggtt
gccaaattattttctggtcaacgcactgatgcatcttcccgccctggatcaaaagctttg
tccttaagatcaacacggaagcgtcatccagctaaaagcttatctgatgactcaattgac
caaaggaatggtgatccgttggacctactcgacagacaaacaatgagattggctctccaa
tcctcatcaaagaaagcattttatgatgagccagagatagaccccgaaggccgtctaatt
gtgcgcgaggatgatgacaagcgtaaaaggaagaagagcctcacctctgatctggactca
gatacaagaagccttttggggagccgttctcttgtgagttcttcaacagtagcacagaag
cgtaggagaacatctgattccggctgggcttacactggcaaagagtataccagcaagaag
gctggcggggatgtcaagaagaaagataagttagaaccttatgcttattggccacttgat
cggaagttgcttaaccgccgtgcagatcgcaaggcggttgcacgcaagggcatgtcaagc
attatgaagtttgcaaagaagcttgaagggaagagtgcttcacgtgcactttctgtcaag
gacactaggttaaaaaagaagcaaaatggtagcaagaagaggtga

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