Typha angustifolia (narrow-leaf cattail): 140760414
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Entry
140760414 CDS
T11061
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00531
Glycosaminoglycan degradation
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
140760414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tang00536
]
140760414
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
140760414
Glycosaminoglycan binding proteins [BR:
tang00536
]
Heparan sulfate / Heparin
Enzymes
140760414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
140760414
NCBI-ProteinID:
XP_072953446
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All DBs
Position
5:complement(join(4456493..4456852,4456950..4457049,4457194..4457319,4457413..4457602,4457683..4457916,4458082..4458230,4458328..4458505,4458616..4458652,4459618..4459866))
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AA seq
540 aa
AA seq
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MGGLLLQILGFCFWAFMWLAGSVTVNPSGGGANDAGEAAVVVDGRYTIATTDDDFVCATL
DWWPPEKCDYGTCSWGLASMLNLNLSSNILLNAVKAFSPLKLRLGGSLQDKVIYGTGGQP
CTPFVKNTSEMFGFSQGCLPMKRWDELNDFFKKAEAVIIFGLNALNGRVPMSDGSLGGPW
NSTNAASFIRYTVNMGYSIHGWELGNELSGSGVGARIGADQYAADVIALKSIVDDAYQGF
PSKPLVIAPGGFFDANWFSELVNKTKPNLMDVITHHIYNLGPGVDSHLIDKILNPSYLDG
EASTFSNLQGILKGAGTSTVAWVGEAGGAYNSGHHLVTDSFVFSFWYLDQLGMAAKYDTK
SYCRQSLVGGNYGLLNTTTFMPNPDYYSALLWHRLMGRKVLATSLTGTNKTRAYAHCARE
SQGITLLLINLSGNTTTQVFITTGNAFAQSMRRRHHTRFRHIPHLGRSLGFVREEYHLTP
KDGDLHSQTMLLNGNILSVDSSGNIPKLEPVQVDATQPITVAPFSIVFAHIPYFFAPACR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcttcttctccagattctgggcttttgtttctgggcattcatgtggttggct
gggtcggtcaccgtgaacccaagtggaggtggagccaacgatgccggcgaggcagccgtc
gtcgtcgacgggaggtacaccatcgcaacgacggacgacgactttgtctgtgccacattg
gattggtggccgccggagaagtgtgattatgggacttgtagctggggacttgcctccatg
ctcaatttgaatctttccagcaacattctactgaatgctgtcaaagcattttctcctctg
aagcttcgtcttgggggttctttgcaagataaggtcatctatggcacagggggccagcca
tgtactccatttgtgaagaacacttctgagatgtttgggttttctcaaggttgcttacct
atgaaaagatgggatgagctcaatgacttcttcaaaaaagccgaggctgtaattatcttt
ggtttgaatgctctaaatggacgggttcctatgtcagatggttcactaggagggccttgg
aattccaccaatgcagcatcttttattcgatataccgttaacatgggttactctatccat
ggatgggagcttggaaatgaactcagcgggtctggagttggggctcgaattggcgcagat
caatatgctgcagatgtgatcgccctcaaatcgatcgtcgatgatgcttaccaaggcttc
ccctctaagccattggtaatagcaccaggaggattctttgatgcaaactggttcagtgag
cttgtcaacaaaacaaaacccaacttgatggatgtaatcactcatcacatctataatttg
ggtccaggtgttgatagccacctgatagacaaaattcttaatccctcttatcttgatggt
gaggcaagcacattcagcaatctgcagggaatactcaaaggagcaggaacttcaactgtc
gcatgggttggtgaggctggtggtgcttacaatagtggccaccatcttgtcactgattca
tttgttttcagcttttggtacttggatcagcttggaatggcagcaaagtatgatacaaag
agttactgcagacagagtttagttggtggaaattatggcttgctcaacactacaaccttc
atgccgaatcctgattactatagtgctctattatggcatcggttaatgggacgaaaggtt
cttgcaacatccttgacaggcaccaacaagacacgggcatacgcacactgcgcaagagaa
tctcaagggattacgcttctgctgatcaaccttagcggcaataccacgactcaagtgttt
atcacaactggaaatgctttcgcacaatctatgaggcggcggcaccacacaaggttcaga
catatacctcatttaggaagaagtcttggatttgtaagagaggaataccacctaacaccc
aaggatggagatctccatagccaaaccatgctactgaatggcaacatcttatcagttgat
tcaagtggaaacattccaaaactagaaccagttcaagtcgatgcgacacagcctataact
gttgcaccattttcaatcgtctttgcgcacattccatacttctttgctccagcatgtagg
tag
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