Typha angustifolia (narrow-leaf cattail): 140760459
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Entry
140760459 CDS
T11061
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140760459
04121 Ubiquitin system [BR:
tang04121
]
140760459
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140760459
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140760459
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140760459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
DUF7129
zf-C3HC4_3
zf-RING_5
zf-RING_16
Prok-RING_1
IBR_1
Anti-TRAP
Ribosomal_S27e
DUF5817
Motif
Other DBs
NCBI-GeneID:
140760459
NCBI-ProteinID:
XP_072953497
LinkDB
All DBs
Position
5:complement(6633885..6634673)
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AA seq
262 aa
AA seq
DB search
MPSNVAGRTCRLFWCYECRSATRIISSPSSEVFCPRCSGRFLLEIDFPRPALSPEVISLP
CIRFHPSRSQNAFDNLPRRRLPTPPIPTPPMERSIPPTVTTEDYFTGPNLNNLIEELTQN
DRPGPPPAPPSTIAAMPTVLVSEAHLTDGSQCPVCKEEFELGEEAREMPCKHVYHSDCIV
PWLSIHNSCPVCRFQLPGGRDGSRNQDGNVEREPNRPRWNPFALLRPRRDYGSGNDEGDD
DLMVLRTFVLVSVCFAVVSFLI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaacgtcgcggggaggacgtgccgcctcttctggtgctatgagtgccgctcc
gccacccgcatcatctcctccccctcctccgaagtcttctgcccgcgttgctccggtcgc
ttcctcctcgagattgactttcctcgccccgccctctcccccgaggttatctccctcccc
tgcatccgcttccaccctagccgatctcaaaacgccttcgataacttaccccgccgccgt
cttcctacgccgcctatcccaactccaccaatggagcgctcaattccacctaccgtcacc
acggaggactatttcaccggcccgaacttaaacaacctcatcgaagagctcacgcagaac
gaccgtcccgggccgccccctgcgccgccctccaccatcgccgcgatgccgaccgtgctc
gtgagcgaagcacatctgactgatggatcgcaatgcccagtttgtaaagaggagttcgag
ttgggggaggaggcgagggagatgccatgcaagcacgtgtaccactcggactgcatcgtt
ccatggctcagtatacataattcatgccctgtttgccggtttcaattgccgggtggaaga
gatggaagtaggaatcaagatgggaatgtggagagagagccgaatcgaccgagatggaat
ccattcgctttgttgcggcctcgacgggactacggatctgggaatgacgagggagatgat
gacttgatggtccttcgtacttttgttcttgtctcggtttgctttgccgtagtctcgttc
cttatttag
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integrated database retrieval system
