Typha angustifolia (narrow-leaf cattail): 140760500
Help
Entry
140760500 CDS
T11061
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140760500
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
140760500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_5
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
140760500
NCBI-ProteinID:
XP_072953582
LinkDB
All DBs
Position
5:join(494918..495475,496271..496699,496811..497062,497746..498117,498981..499054,499128..499239,499874..500017)
Genome browser
AA seq
646 aa
AA seq
DB search
MVDDAAAAGEPSPTTPSSAGSKRRHPSSSFRAPQNPPLKPSSETLFRVLCPSERINSIFP
IIPHLTAKIRFDEPVPGSDDRVVIIAAEFHTKKEASASSEEASPAQRALLRVFERILGVE
EEEAKEKEVEGPVVCRLLAPGSQVGCVLGKGGKIVEKIRQESGAQIRVFGKDQVPPCAAP
GDELIHISGSFFAARKALLSVSSCLQDNPRLDAVNFAITRPFGATARGTGSPVQVDPYSQ
RMSSMHISDYHFKGHPSNLGVDTVASRHRKFIEEEVVFRMLCSHDRVGSIIGKGGVIVRA
LQNETGASIKVVDIVSDSDERVIVISARENTELKHSPAQDAVLRVHSRLAEAGNDKGSAV
SARLLVPAQQIGCLLGVGGTIIAEMRKETGASIRIFVKEQVPKCAQANDEVVQVSGTFQA
VQDALLQITSRIRETIFPVRPYTSVGMTHYSPGAPDFPPNVPRSRQEPTTPGRYPSIGLS
LGAEPSFALSDTIDRQPALSRVVDHLRVDQPPFSYACQNTGPRPSIDRPSPRSWAPEVPG
SGNQRGLPDGGAGSDFRGAIGSGNQINMSASMTTEVIIPQQYLGFIYGENGSDLDEIRKM
SGAIVTIHDRKPGETIGTITIYGTPDQTKMAQSLLHAFIFCGLFPS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgacgccgccgccgccggcgaaccctcgcccaccaccccctcctctgccgga
tcgaaaaggcggcacccctcctcctcttttcgtgctccgcaaaaccctcccttaaaaccc
tcctcggagaccctcttccgagtcctgtgcccttccgagcgcatcaactcgatcttcccc
atcatcccccacctcacagctaagattcgcttcgacgaacccgtccccggctccgacgac
cgcgtcgtcatcattgccgccgaattccacaccaagaaggaggcatccgcctcttctgag
gaggcttcaccggcgcaaagggcgcttcttcgggtttttgagcggattcttggggtcgag
gaggaggaggcgaaggagaaggaggtagaggggccggtggtatgccgtcttcttgcgccg
ggtagtcaggtgggttgcgtgctcgggaaagggggaaagattgtggagaagattaggcag
gagagcggagcacagattagggttttcgggaaggaccaggtgcccccatgcgctgctccg
ggggatgagctgatccatattagcgggagcttctttgctgcaaggaaggcactattatct
gtttcgagttgtcttcaggacaaccctagattagatgcagtaaactttgccattacaagg
ccatttggggcaactgcccgtggaactggttctcccgtacaagtggatccttacagtcaa
aggatgtcaagtatgcatatctcagattatcattttaaggggcacccatcaaacctcgga
gtagacactgttgcttctaggcataggaagtttattgaagaggaagttgtgttcagaatg
ttgtgctcgcatgatagagtaggtagcatcatcggaaaaggaggtgttattgttcgggct
ttgcaaaatgaaactggtgcttccatcaaggttgttgatattgtctcagattcagatgag
agagttattgtgatatctgcacgtgagaacactgagttgaaacattctccggctcaagat
gctgtccttcgtgtacactctagacttgcagaggcaggaaatgataaaggttctgctgtt
tctgctaggcttcttgttcctgcccagcagattggttgtctcttgggtgtgggtggaact
attattgcagaaatgagaaaagaaactggtgctagtattcggatttttgtgaaggaacaa
gtcccaaaatgtgctcaagcaaatgatgaagttgtccaggtgagtggtacctttcaagct
gttcaggatgcattgcttcaaatcactagcaggattcgagagacgatttttccggtgaga
ccatatacaagtgtaggcatgacccactattcacctggagcgcccgatttccctcccaat
gtgcctagatcaagacaagagccaacaactcctggacgatatccttcaattgggctctct
cttggtgctgagccttcctttgctctctctgataccatagatcggcagccagctctctca
cgtgttgtggatcatctccgggttgatcaaccccctttttcttatgcttgtcaaaataca
gggcctcgcccttctatagatcgcccttcaccaagatcatgggctcctgaggtaccaggc
agtggaaatcagagaggccttcctgatgggggagctggctcagatttcagaggagcaata
ggaagtggaaaccagataaatatgtcagcaagcatgacaacagaagttataattcctcag
cagtatttgggatttatttatggagaaaatggcagtgatcttgatgagatcagaaagatg
tcaggtgctattgtcacaattcacgaccgaaagcctggagaaacaataggaacaatcact
atatatggaaccccagatcagaccaaaatggcacaaagccttctccatgcttttatcttc
tgtggactttttccatcttga
DBGET
integrated database retrieval system
