Typha angustifolia (narrow-leaf cattail): 140760599
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Entry
140760599 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140760599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140760599
Spliceosome [BR:
tang03041
]
Common components
Common spliceosomal components
SR proteins
140760599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
eIF-3_zeta
Motif
Other DBs
NCBI-GeneID:
140760599
NCBI-ProteinID:
XP_072953723
LinkDB
All DBs
Position
5:join(7360212..7360287,7360368..7360446,7360555..7360634,7360733..7360799,7361442..7361513,7361934..7362149,7362218..7362470,7362572..7362580)
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AA seq
283 aa
AA seq
DB search
MSHFGRSGPPDIKDTYSLLVLNISFRTTPDDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRNVDGRNIMVQFAKYGPNAEPIQKGRIMEEMPKKRGRSRSH
SPRPRHRDDYRDRDHRRRSHSRSRSGGRYERERYREKERDRRRRSRSHSASPDYSRGRGR
GRLDDDRRRSRSRSYDSASPVRRSLSPRRSPSPRRSPAPRRSPSPRRSPPSRDQSIEKVN
GEHLPPSKSVSPRARRAISRSVSPRARRAISHSASPHSADEDR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttgggaggtccggtcctccggacatcaaggacacctactcccttctcgtc
ctcaacattagcttccgtactacgccggacgatctctttcctctctttgatcggtatgga
aaggttgtggatgtcttcattccaagagatcgaaggactggggattcccgtggatttgcg
ttcgtgaggtacaagtacgctgatgaggcgcagaaggcagtggaaaagctggacggccgg
aatgtggatggccgtaacatcatggtgcaatttgctaaatatggtccgaatgctgaacct
attcagaaaggaagaattatggaagaaatgccaaaaaaaagaggcaggtcgagaagccat
agccctaggcctaggcatagagatgattatcgtgatagagatcataggagacgaagccac
agccggagccggagcggaggaagatatgaacgtgaaaggtatcgtgaaaaagaaagagac
cgtcgtcgtcgaagcagaagccacagtgcgagccctgattattctagggggcgaggtagg
ggaaggttggatgatgatcgacggaggagtaggagccgctcatatgatagtgcttcacct
gttcggcgtagcttgagtcctcgtaggagcccttcacctcgtaggagccctgcacctcgt
aggagcccttcacctcgtaggtcacctccttctcgtgatcagagcatcgagaaagtgaat
ggggaacatttacctccttctaaaagtgtttctccacgagctcgccgtgcaatttcccgt
agtgtttctccacgagctcgccgtgcaatttctcatagtgcttctcctcacagtgctgac
gaggaccgatga
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