KEGG   Typha angustifolia (narrow-leaf cattail): 140760635
Entry
140760635         CDS       T11061                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03440  Homologous recombination
tang03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    140760635
   03460 Fanconi anemia pathway
    140760635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tang03032]
    140760635
   03400 DNA repair and recombination proteins [BR:tang03400]
    140760635
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     140760635
DNA replication proteins [BR:tang03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    140760635
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     140760635
    Bloom's syndrome complex (BTR)
     140760635
   FA (Fanconi anemia) pathway
     140760635
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-GeneID: 140760635
NCBI-ProteinID: XP_072953771
LinkDB
Position
5:join(6036415..6036565,6036749..6036856,6036980..6036987,6037071..6037154,6038451..6038591,6038699..6038733,6038868..6038951,6039850..6039938,6040477..6040629,6040734..6040830,6042968..6042971,6045603..6045752,6045826..6045918,6045987..6046052,6046166..6046296,6046695..6046789,6048234..6048361,6050615..6050724,6052095..6052593)
AA seq 741 aa
MKKPLLPMKHETSYESNVIEKEDLVKILEQFFGHPAFRGKQLEAIEAILAGRDCFCLMPT
GGGKSMCYQIPALAKPGIVLVISPLIALMENQVATLKSKGISAEFLSSTQTVQTKEKIHE
DLDSGKPSLKLLYVTPELVATFGFMTKLSKLYNRGLLGLVAIDEAHCISSWGHDFRPSYR
KLSSLRKKLPGVPLLALTATAVPKVQKDVIESLSLQNPVILRASFNRPNIFYEVRYKDLL
DDAYSDLSNLLKSSGNVCSIIYCLERSSCDDLTSHLIKQGISSAAYHAGLNSKLRSAVLD
DWLSSRIQVVVATVAFGMGIDRKDVRIVCHFNMPKSMESFYQESGRAGRDQLPARSVLYY
GLDDQRRMEFILRNAGSKKSQPSSSSDGYAEKSLADFNQVVEYCEGSSCRRKKILETFGE
QVPASLCQRSCDACKHTNLVSMRVEELHRVPNSHKNRFFPIFIKSSLTNTSEAKDTEFWN
REDEKSLSGDEISDSDDGRDVLSSVTMSKISSKAGLGEKFEALQRAEEAYYRNKGQKKQD
CSLVDKKAISDVLRDSSKKRLLDTLKQALRRLGHSLSDLEASATFLEMECFNKYSKVGKT
FYNSQIAATVRWLSSSSYEQIHDRLRANSTPHAVPCTQNSLPSVHSSLPNSDLVDEMPTT
SRCEQNWNNEQLDHSSECTETKNPSERAVLPPIPSFLEFVNQKGKVGRASSSEAQSKRST
IVRKRVMDFESEDGKKCRKKD
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgaagaaacctcttcttcctatgaaacatgagaccagttatgaaagtaatgtaattgaa
aaggaagatttagtgaagattttggaacaattttttgggcatcctgcattcagaggaaag
caattggaggccattgaagctattctagcaggaagagattgtttctgtttgatgccaact
ggaggtggcaagtctatgtgttatcagattccggctttagcaaagccaggcattgtactt
gtaatctctccattgatagcactgatggaaaatcaagttgcaacattgaagagcaaagga
atttctgctgagtttctctcttcaacacagactgtgcaaactaaagagaagatacatgaa
gaccttgattctggtaagccatctcttaagttgctatatgtgacgcctgagttggtcgca
acctttggatttatgacaaagctgtcaaagctttataatagagggctactaggtctagtt
gccattgacgaggctcactgcatttcatcgtggggccatgacttcagacctagctatcga
aaactgtcatctttaaggaagaaactgccaggtgtgcctctgttagctttgacagcaact
gctgttccaaaagtccaaaaggatgttatagaatcattgtctctgcagaatccagttatt
cttagggcgtcttttaatcgtcctaacatattctatgaagttcgttacaaggatcttctt
gatgatgcttattctgatctgtcaaatcttcttaagtccagtggaaatgtttgttcaatt
atttattgtcttgaacgatcttcttgtgatgacctaaccagtcatctgataaagcagggt
atctcctcagctgcttaccatgctggcctaaacagcaagctgcggagtgctgtactggat
gattggctttcttctagaattcaagttgttgttgcaacagtggctttcggaatgggtata
gatagaaaagatgttcggattgtttgtcactttaacatgccaaagtcaatggaatccttc
tatcaggagtccggaagagctggtcgtgatcagttgcctgccaggagtgttttgtactat
ggattggatgaccagaggagaatggaatttattttgagaaatgctggtagcaaaaaatca
caaccttcatcctcgtcagatggctatgcagagaagtccctagcagatttcaaccaggtg
gtggagtactgtgaaggttctagctgccgccggaagaagatccttgaaacctttggagaa
caggtccctgcatcattatgtcaacggtcgtgtgatgcctgcaaacatacaaatcttgta
tctatgcgtgtggaggaacttcatcgtgtgcccaacagtcacaagaatagattctttcct
atttttattaaaagctcgcttaccaatacttcagaggccaaggacactgagttctggaat
cgagaagatgagaaaagtttatcgggtgatgaaatatcagattctgatgatggaagagat
gtcttaagcagtgtcactatgtcaaagatatcatcaaaagcaggactaggtgaaaaattt
gaggctttgcaacgagcagaagaggcttattatcgaaataaaggccagaaaaagcaggat
tgcagtcttgttgataagaaggctatatctgacgtgttgagagattcaagcaaaaagagg
ctacttgacactctaaaacaggccctgcggcgcctgggtcattcattgtcggatttggag
gcttctgcaactttccttgaaatggagtgcttcaataagtactcaaaggttggcaagaca
ttctataactcacagatagctgctacagttaggtggctatcgtcttcaagttacgagcag
atacatgaccgtcttcgtgccaattctactccacatgcggttccttgtacgcaaaattcc
ctcccctctgttcattcttcacttcctaactctgatctagtcgatgaaatgccaacaact
tctagatgtgaacaaaactggaacaatgagcaattagatcattctagcgagtgcactgag
acaaaaaatccaagtgagagggcagtgcttcctccaattccatcttttttggagtttgtt
aatcagaaagggaaggtgggccgagcaagctcttctgaggcgcagagtaagcgttccaca
attgtgaggaagagggttatggattttgaaagtgaggatggaaaaaaatgccgaaaaaaa
gattaa

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