KEGG   Typha angustifolia (narrow-leaf cattail): 140760738
Entry
140760738         CDS       T11061                                 
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
  KO
K22803  structural maintenance of chromosomes protein 5
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140760738
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     140760738
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_29 ABC_tran AAA_16 NACHT AAA_27
Other DBs
NCBI-GeneID: 140760738
NCBI-ProteinID: XP_072953823
LinkDB
Position
6:complement(join(8821687..8821745,8821835..8821938,8822041..8822113,8822189..8822276,8822357..8822405,8822970..8823024,8823116..8823215,8823334..8823411,8823480..8823596,8824026..8824129,8824523..8824595,8824706..8824783,8824944..8825068,8825158..8825221,8825289..8825434,8825529..8825694,8825836..8825934,8826023..8826151,8826599..8826664,8826742..8826886,8826973..8827094,8827231..8827386,8827466..8827577,8827766..8827911,8827998..8828102,8828329..8828478,8829161..8829234,8829378..8829531,8829623..8829800,8829885..8829925))
AA seq 1051 aa
MEHRAAKRLKLHQRGEDDYVPGNIVEIEIHNFMTYDHLTCKPGPRLNLVIGPNGSGKSSL
VCAIALGLAGEPQLLGRASSIGAFVKRGEESGYIKISLRGDTAKEIITITRKIDTRNKSE
WVLNGVAVPKRDVIEVIQKFNIQVNNLTQFLPQDRVCEFAKLSPIQLLEETEKAVGNPEL
PVQHHALVEKSRELKKLELAVKQNGDTLNQLRALNAEQERDVERVRQREKLLAKVDLMRK
KLPWLKYDMKKMEYKEAQKQEAVGKKKMDEAAKVLNDLISPIEKRKKMKATQESSCKKLS
NQMTQNANNRRDAIEKECQMGVQVRAKYDEMEDLKRQEESRQRRIAKAKEDLVAAESELA
GLATYEPPREEMERLSAQVMELNFEVNQMKMRRKEKESQLAHEKGILRKCSERLKEMESK
NNKLLLALQNTGADKIFEAYSWLQEHRSELKKEVYGPVLLEVNVQDQAHAAYLENHVPNY
IWKSFITQDASDRDFLVRNLKSYDVPILNYVAERSISRVPFNITHEMQEIGIYSRLDQVF
DAPDAVRNVLISQAALEYSYIGSDVTHRKADEASRLGILDFWTPDNHYRWSKSRYGDHMA
ASVEQVNPSRLFKCNLDIGDIERLRSRKVELESDIAEMEESLRLLQKEQRQLEDEMAKIH
KRREEIIENVKSDKKKHQEMQRRVDIRRRKLEDINKEEDLKSSTKKLIDQAALLNEQRFQ
MAMKIKNLLIEAVALKWSFMEKNLMSIEIDTKIREMEMDVKQHQKSAIQAATHYENCKKE
TEQCKIQLYDAKRQAESVAVITDDLAQEFLQMPGTIEELEVAIQDNLSEANSILFLNQNI
LQEYESRQRQIDAIATKLEADEKELKRCLCDINTLKGKWLPTLRNLVTKINETFSHNFQE
MAVAGEVSLDEHEVDFDQFGILIKVKFRQTGELQVLSAHHQSGGERSVSTILYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVRAASQLNTPQCFLLTPKLLPDLEYSEACSILN
IMNGPWIEKPAKVWSNGECWGSVMGLEGERV
NT seq 3156 nt   +upstreamnt  +downstreamnt
atggagcatcgcgccgccaagcgcctaaagctccaccaaaggggagaggacgattatgtt
ccggggaacatagttgagattgagatccataactttatgacctatgaccatctcacgtgc
aagcctggcccccgccttaatctcgttattggaccgaatggatccgggaagagctctttg
gtttgcgccattgctctcggccttgctggagagccgcagcttcttggacgggcgtcgagt
ataggggcatttgtgaaaaggggggaggagtctggatatataaagatatcgttgagaggc
gatactgccaaggaaattattactattacgaggaagattgatacacgcaacaagtctgag
tgggttctcaatggtgtagcagtgccaaaaagagatgtaattgaggtcatccagaaattc
aatatccaagtgaacaatctaactcagttcttgccccaagatcgggtatgtgagtttgct
aagcttagtccaattcaacttctagaagagactgaaaaagctgtcggtaatcctgagttg
ccagttcaacatcatgcacttgttgaaaaaagtcgtgaattgaagaagcttgaattggct
gtcaagcaaaatggagatacactaaatcagcttagggccctaaatgctgaacaagaaaga
gatgttgagcgtgttcgccagagagagaaactgttggcaaaggttgacttgatgagaaag
aaattaccttggctaaaatatgatatgaagaaaatggaatataaagaagcacaaaaacag
gaggctgttggcaagaagaaaatggatgaagcagctaaagttttgaatgatcttataagc
cccattgaaaagcgaaagaaaatgaaagctacacaagaatcaagttgcaagaaactaagc
aatcagatgacccaaaatgcaaataatcgcagggatgccatagagaaggaatgccagatg
ggggtgcaagtacgagcaaaatacgatgaaatggaagatctgaaaaggcaggaggaatcc
cgccaacgaaggatcgcgaaagctaaggaagatctagttgctgctgaaagtgaacttgca
ggtcttgcaacttatgaacctccgagagaggaaatggagagactcagtgctcaagttatg
gagctaaattttgaagtaaatcaaatgaaaatgcggaggaaagagaaggaatcacagtta
gctcacgagaaaggaatcttgaggaagtgttcagagaggttgaaggagatggagagcaag
aataataagttacttttagcattacaaaatactggtgcagataaaatatttgaagcttat
agctggttgcaggaacatcgtagtgagttaaagaaagaagtatatgggcctgtccttctt
gaggtaaatgttcaagaccaagcacatgctgcttacttggaaaaccatgtgccaaattac
atatggaagtccttcattactcaggatgcttctgatagagatttcttggttagaaatcta
aaatcatatgatgtccccattcttaactacgtagcagaaaggagcattagtagagtacca
tttaatattacgcatgagatgcaagagattgggatttattcccggcttgatcaagtattt
gatgctcctgatgctgtgagaaatgtgttgataagccaagctgctttagaatattcgtac
attggttccgatgtaactcatcggaaagcagatgaagcatcacgattaggtattctggat
ttttggactcctgataatcattaccggtggtccaaatcaagatatggtgatcacatggca
gcaagcgttgagcaagtgaatccttctcgcctttttaagtgcaatttggatattggtgac
atagagagacttaggtctagaaaggtggaactagagagtgatattgctgaaatggaagaa
agcttgagattgcttcagaaagaacagaggcaattggaagatgaaatggctaagatacac
aaacggcgggaggaaatcattgaaaatgttaagtctgataagaagaaacaccaagaaatg
caaaggcgtgttgatataaggagaagaaagttggaagacataaacaaagaggaagacctg
aagtcaagtacaaaaaagctcattgaccaagcagcactattgaatgagcagcggtttcaa
atggcgatgaaaatcaagaatttactaattgaagctgttgctcttaaatggagtttcatg
gaaaagaacttgatgtccattgagattgatacaaagataagggaaatggagatggatgtt
aagcagcatcagaagtctgctattcaagcagccacccactatgaaaattgtaagaaggaa
actgagcaatgtaaaatccaactctatgatgcaaagcgtcaagctgaatcagtagctgtt
ataactgatgatcttgcacaagagtttcttcagatgcctggtaccattgaggagctagaa
gttgctattcaagacaatttatctgaagcaaattcaattttatttcttaatcagaatatt
cttcaagaatatgaaagcaggcagcggcagatagatgccatagcaactaaacttgaagca
gatgaaaaagaactgaagagatgcttgtgtgatataaataccttaaagggtaagtggctt
ccgacattgcgaaaccttgttacgaaaataaatgagaccttcagtcataacttccaagag
atggctgttgccggagaagtttcattggatgagcatgaagtagattttgatcagttcggt
atcctcataaaggtgaagttcaggcaaacaggagagcttcaggtgctaagtgctcatcac
caatccggaggggaacgctcggtctcgaccattctttatcttgtttctcttcaagatctc
acaaattgcccatttcgtgtggttgatgagataaatcaagggatggatcctataaatgaa
aggaaaatgtttcaacaacttgttcgagctgccagtcagctaaatacaccacagtgtttc
ttgctgaccccaaagttgctgcctgatctggagtacagcgaagcttgtagcattttgaat
atcatgaatggcccatggatagagaaacccgcaaaagtatggagcaacggcgaatgttgg
ggatcagtgatgggtcttgaaggggagagagtttaa

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