KEGG   Typha angustifolia (narrow-leaf cattail): 140760770
Entry
140760770         CDS       T11061                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144  Endocytosis
tang04145  Phagosome
tang04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    140760770
   04145 Phagosome
    140760770
   04148 Efferocytosis
    140760770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140760770
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140760770
   04031 GTP-binding proteins [BR:tang04031]
    140760770
Membrane trafficking [BR:tang04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    140760770
 Endosome - Lysosome transport
    140760770
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140760770
  Exosomal proteins of other body fluids (saliva and urine)
   140760770
  Exosomal proteins of colorectal cancer cells
   140760770
  Exosomal proteins of bladder cancer cells
   140760770
GTP-binding proteins [BR:tang04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    140760770
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU ATPase MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 140760770
NCBI-ProteinID: XP_072953874
LinkDB
Position
6:join(9032596..9032620,9034593..9034669,9035361..9035444,9035616..9035710,9035901..9036006,9036110..9036199,9036315..9036401,9037347..9037388)
AA seq 201 aa
MGCSSSLPASNAGSLNNLNSESSAVTDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTLALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPES
FNKAQYWVKELQKHGSPDIIMALVGNKADLHENRSVSAQDAQEYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRTSSSS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgctcgtcctctctcccagctagcaatgctggatcgttaaacaatctgaacagt
gaaagctctgctgttactgactcaaagaacttgagagtcaagcttgtattgttaggagat
tcaggtgttggtaaaagttgcattgttcttcgctttgttcgtggtcaattcgatcccact
tccaaggtaactgtaggtgcttcatttttatcacaaacgttagccttgcaagactctact
accgtaaagtttgaaatttgggatactgctggccaggagagatatgctgcattagcacct
ctttactaccgaggagctgctgttgcagttgtcgtatatgacataactagtccagagtca
ttcaacaaagcacaatattgggttaaggaacttcagaaacatggtagtcctgatattatc
atggctttggttggtaacaaggctgatctccatgaaaatcggagtgtatctgctcaagac
gcacaagagtatgcggagaagaatggcatgtttttcattgagacatctgcaaagacagcg
gataacataaaccaactctttgaggagattgcaaagcggttgcctcggacatcatcctct
tcctga

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