Typha angustifolia (narrow-leaf cattail): 140760771
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Entry
140760771 CDS
T11061
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140760771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140760771
Spliceosome [BR:
tang03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
140760771
Complex B
140760771
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_YTH1
DUF3824
RRM_occluded
xRRM
Motif
Other DBs
NCBI-GeneID:
140760771
NCBI-ProteinID:
XP_072953875
LinkDB
All DBs
Position
6:join(6043351..6043435,6044138..6044310,6044926..6045019,6045891..6045979,6050205..6050498)
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AA seq
244 aa
AA seq
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MSGDSEAPSVTPNMTIYINNLNEKIKIDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAW
VVFEDVSSASEALKRMQGFPFYDKPMRIQYAKTKSDIIAKSDGTFVPREKRRRHDERAEK
KRREQHHDASQVGLNSSYPGAYGAPPPLSQLPYSGGAKSMLPEAPALPNNILFVQNLPHE
TTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQSFKITQQNPMLIT
YAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatagtgaagccccctcggttacgcccaatatgaccatctatatcaacaat
ctcaacgagaagatcaagatcgatgagcttaaaaagtccctgaatgctgttttcagccaa
tttgggaagatactggaggtccttgcatttaagactttaaaacataaaggacaagcatgg
gtagtctttgaggatgtgtcatcagcatccgaggctctcaaacggatgcaagggtttccc
ttctacgacaagcctatgagaatccagtatgctaagaccaaatcagacataatagcaaag
tctgatggcactttcgtccctcgagaaaaacgacgaaggcatgatgaaagagctgaaaag
aagcgtagggaacaacaccatgatgctagtcaagttgggctcaattcctcttatcccggt
gcttatggagctcccccaccactctctcagttgccttactctggaggggccaaatctatg
cttccggaggcaccggccctgccaaacaacattctctttgttcagaaccttccgcacgag
actactccaatgatgctgcaaatgcttttctgccagtatcctggttttaaggaggtaagg
atggtagaagcaaagccagggatcgcttttgtggagtacggagatgagatgcagtctact
gttgccatgcaaggccttcagagtttcaaaataacacaacaaaatcctatgcttattaca
tatgcgaagaagtag
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