Typha angustifolia (narrow-leaf cattail): 140760790
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Entry
140760790 CDS
T11061
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140760790
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140760790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140760790
NCBI-ProteinID:
XP_072953902
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All DBs
Position
6:join(9450914..9451014,9451097..9451174,9451255..9451320,9451654..9452296,9452394..9452497,9452572..9452710,9452821..9453042)
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AA seq
450 aa
AA seq
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MASLRWLSLLVLGLLVVLAGSLGWIGGENLSLTRVGRGANSRRRLRDAAGNEKSSPTTAR
TRGEAVMGAVDDPEFVVSEVHNSINNSTARRELGYLTCGTGNPVDDCWRCDPDWQVNRKR
LADCAIGFGRNAIGGRDGRYYVVSDSGDDDPVNPKPGTLRYAVIQEEPLWITFERDMVIT
LKQELIMNSFKTIDGRGANVHIANGACITVQFVTNIIIHGIHIHDCKPTGNAMVRSSPSH
YGWRTMADGDGVSIFGSSYIWVDHCSLSNCADGLIDAIMGSTAITISNNYFTKHNEVMLL
GHSDSYVRDKAMQVTIAFNHFGEGLMQRMPRCRHGYFHVVNNDYTQWEMYAIGGSAEPTI
NSQGNRYLAPTNPFAKEVTKRVDTDESKWKNWNWRSEGDLLLNGAFFTPSGAGASASYSR
ASSLGAKSSSMVGSITSGAGVLSCRSGSVC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctacggtggctctcattgcttgttcttggtctcttggtcgttctcgcagga
agcctcggatggattggtggcgagaacctctcattaacgagggttggaagaggagctaat
tcgaggaggaggctgagagatgcggcgggcaacgagaagtcgtcgccgacaacagcgaga
acccggggagaagcggtgatgggagcagtcgacgatccggaattcgtcgtctccgaagtc
cacaactcgattaacaatagcactgcacgccgggagctcggctatttgacatgcggcacg
ggcaaccccgtcgacgactgctggcgctgcgacccggactggcaagtgaaccgcaagcgc
ctcgccgactgcgctatcggattcgggcgcaacgccatcgggggccgggacggccggtac
tacgtcgtctcagattcgggcgacgacgaccccgtcaacccgaaacccggcaccctccgc
tacgccgtcatccaggaggagcccctgtggatcacattcgagcgcgacatggtcatcacg
ctcaagcaggagctcatcatgaacagcttcaagaccatcgacggccgcggggccaacgtc
cacatcgctaatggggcctgcatcaccgtccaattcgtgaccaacataatcatacatgga
atccacatccacgactgcaagcccacagggaacgccatggtgcgttcttcgccatctcat
tacgggtggaggaccatggcggatggtgacggggtttccatatttgggtcgagctacatc
tgggtggatcactgctcgttgtcgaattgcgcggatgggctcatagatgccatcatgggc
tccactgccataactatttctaacaactatttcaccaaacacaacgaggtgatgctatta
ggccatagcgattcctacgtacgagacaaggccatgcaagtgacaattgcatttaaccat
ttcggcgaaggactcatgcagagaatgccaagatgtaggcatggctacttccatgtggtg
aacaatgactacacccagtgggaaatgtacgccattggtggcagcgcagaaccaaccatt
aacagccagggcaatagatacctggctcctacaaacccctttgcaaaggaggtgacaaag
agggttgacacggatgagagcaagtggaagaattggaattggagatcagaaggagacctc
ctacttaacggagccttcttcaccccatctggagccggtgcatctgcaagctattccagg
gcgtctagcctcggggccaagtcttcttccatggttggatcgatcacttctggagcagga
gtactatcttgccgcagtggttctgtttgctag
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