KEGG   Typha angustifolia (narrow-leaf cattail): 140760869
Entry
140760869         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K14311  nuclear pore complex protein Nup188
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140760869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140760869
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140760869
SSDB
Other DBs
NCBI-GeneID: 140760869
NCBI-ProteinID: XP_072954029
LinkDB
Position
6:join(3570846..3570983,3571060..3571233,3571955..3572050,3576709..3576778,3581499..3581620,3587719..3587859,3587955..3588112,3588292..3588457,3588535..3588633,3601450..3601527,3601626..3601685,3601778..3601935,3609962..3610163,3616462..3616581,3618323..3618408,3618521..3618631,3619940..3620011,3623859..3623947,3625349..3625494,3625771..3625914,3626013..3626120,3627086..3627196,3630672..3630773,3630889..3630999,3642827..3643005,3643247..3643450,3643568..3643805,3648353..3648460,3648606..3648664,3652343..3652733,3652845..3654386,3654968..3655175,3655273..3655361)
AA seq 1959 aa
MASAAAAINQAASPKPVDDSLWWDSYVLLFEELDRVPLSDDLPDHLVKVLRSNHSWFLDS
VSRFKPPDEASRLALESTDIIAGSNRLGIRSEIKEAALRICKCLSLDEVQSYILIERSSE
FNISVVDVEDREFLHSVLLRYYLERQCLLKCVRRILVHALYASNGSAIRREALQLVNNGL
EKRLISIFEDLLSTVFSVRNEAEFTVLWVEETLIEETLILDILFLIFYDNFSTCSVGQWK
TLCSLFKGMLCGPFDVGKLAVTVEAKDTFCHAKAQLLLILIETLDLENLLRMVHDEVPFR
EGFSAFSLSDIQEIDAEVSSLSELRIVESGPLVLAWAVFLCLLSSLPESTTSLFMEIDHT
GYVRQAFEVAPFRYLMDILCSDTMRESDGPVSGFLSIFRTLLSAFIASYELSLQTEDNYL
SMILDILCQIYRCEESLCMQFWDKDSFVDGPIRSLLYMLEKEYPLQTVEFIRFLSAVCEG
SWAAQCVYNYLEKMSSITTLYEIPDDSVAVNIHHLIEIDYQMTIPGIEGHVIPNGTHGHV
LKVIGENAVLVRWECAHSGILLFLFKLVQGLHSYNFEEVYHIVDLLCRLISSNKALCLSL
LHAEKSLAVGVSKELGQIEKDVRIDVVNIICTSMFNLIQDVNNISVVSNFFKMLAEFLNC
APSHVFELALKSPVFATEINGPSSGSWFLSCGLAKMFFAACEEERDCCLLTISVLDFIIQ
VLEKGAEDSVLSALIEFFLQFVLVNHMHWKYKKHSRWKATLKILELLRSCIKTIPVSSTL
GGIIQDILLYDSSVHNILLRIMFMSTQSLEMLYASHHRELKEIEDLHLVICLALDIVHSM
LAALSEESFTDQPAFVNMVLSSASKPMPFITAVTSLVSFFHNPAIQAAASRVFSKICFIA
SRIQSMENANLVADAMQNSKLRAAIYCILEGKKNQDDTLIVSMFNLLHSAACYQPALLVS
LILKEENAKTELNANGNTDQLAASPIIQISSSKDAKLIDLIMKYIERSKDLFNSFPRLLL
SVLDLLKAFWEGGLQYVDILERIRSTKNFWENLSACISSIPDRNVFPVGSQNDDDSQYIS
IRYLCQGTVLEIMACELFLQKRLQDEKPAKKTRSLDGQIRSSNMLDSEGILKTWCHSSIM
ESLIKSYSSTGYDRELVRQAKVVVCLCIVHLITKVSTGDMGSLSMPLVKQLHVISAKLSQ
HPAFSALLSQYSLCGYSGRKELSNLVMNDLYYHLQGELEGREITSGPFQELLHFLLSLEA
FQNEERRKDKSSAQVVKDSCMFDVLHIRRELGIDLWCYSGSGWKESKEIAEKMLMIIHNA
NLMMSESASKHFALKSLIAALSVYMGRSDERKSKLLVEGMSDQLVLSGIRYVCKTLQETV
DSAIPHSNTNEVLLQFLSAHAELLLTLTRIHFEQRKCRREFFPILALLIKTSGSVIQILS
DIRPFNLAPNKVVKLLLMLLLTSLRFTYSVENMKDEPDLELNLFSEVSISSIGVLPVLCK
YAENSEYSNPSVASLDLMLKGYLTPNIWFPVLQKHLRLQVILRKVLMKDASVSAHVIFNF
CLTLARTKDGAKMLHLADIFSSLKVLLSQLNIGDPLLSDGTSSISQGKHVHLWQLGLAIM
TSVIYCIGDDSYIDIVDNSIRFLSEKAHIIFSFSLSAPNVPVDDQSKNRGILQKSKTSLG
DLILTEHTLMLICELAKHHALWSMGMKEITSGLNETIIHLLAFISKGNLRGGESSNFNLH
FECPPTVKEEVDFDEIPSAMKSKQGWFSLSLCSMRNATVSDQTHAGLPLVNKDQANEDSD
LVWPTLFTNMVATQIYKIAFLILKFLCMQAKAAVKRAEEVAFIDLAHFPELPMPEILHGL
QDQTTAIITDMCEGNRSKCLPVETENVCLLLLQILEKSVYLEFCVSQSCGIRPVLGRIED
FSKEIKAMMHVAEQHSKFKSSLKSLKQIIALQYPELLHQ
NT seq 5880 nt   +upstreamnt  +downstreamnt
atggcgagcgccgctgcagccatcaatcaagctgcgagccccaagcccgtggacgattcc
ctctggtgggattcttatgtccttctcttcgaagaactcgatcgcgttcctctctccgac
gacctccccgaccacctggtaaaagtccttaggagcaatcactcgtggttcttggactcg
gtctctcgctttaagcctccagacgaggcttccaggttagctctagaatctaccgacata
atcgcaggatccaatcgtctgggcatacgatctgagataaaagaagccgccctccgtatt
tgcaaatgcctgagcttagatgaggtgcagtcgtacattcttattgaaagatcttcagag
ttcaacatatcagttgttgatgttgaagatcgagaatttcttcattcggtactgttgcgc
tattaccttgagcggcaatgcttgttgaagtgtgtgaggagaattcttgtgcatgcttta
tatgcgagcaatggatctgccatcaggcgagaggccttgcagttagttaataatggattg
gaaaagaggctaatttccatattcgaagatctgctttcaactgtattttctgtgagaaat
gaagctgaattcacagtcttgtgggtagaagagactttgattgaagaaaccttaattttg
gatattttgttccttatattctatgataacttctctacttgtagtgttggccaatggaaa
accttatgctcacttttcaagggcatgttatgtggtccatttgatgttggaaaactagct
gtaacagtagaggcaaaagatacattttgtcatgcaaaagctcagctactccttattctt
attgagactctagacttggaaaatcttcttcgcatggttcatgatgaagtacctttcagg
gaaggcttttctgcattttctttatcagatattcaagagatagatgctgaagtctcaagc
ttatctgaattgcggatagtagaatcaggtcctttagtgcttgcatgggctgtttttctt
tgtttactctcgtcacttccagaaagtactaccagtttgttcatggaaattgatcatact
ggttatgtccgtcaagcctttgaggttgcacctttcagatatttgatggatattctttgt
agtgatactatgagggaatcagatggtcctgtttctggttttttgagcatctttagaact
ttactttcagctttcattgcctcctatgaactatctcttcagacagaagacaactacctg
agtatgattctagatattctgtgccaaatttatcgttgcgaggaatcactttgtatgcaa
ttctgggataaagatagttttgttgatggcccaattcgatctctcctttatatgttagag
aaagagtaccctctccaaacggttgagtttattcgctttctatcagctgtttgtgaagga
agttgggctgcacagtgcgtatacaactatctagagaagatgagcagtataacaacatta
tatgagattcccgatgattctgttgctgtgaacatccaccatctaatagagattgattac
cagatgacgatacctggtatcgaaggtcatgtaattcctaatggaacacatggacatgtg
ttaaaagttattggcgagaatgctgtattagttcgttgggagtgcgcacactctggaatt
cttctttttctgtttaaactggtacaagggctccattcatacaattttgaggaagtctat
catattgttgacctactttgtcggttaatatcttctaataaggcattgtgtctttctttg
ctacatgctgagaagtcgttagctgttggagtttcaaaagagttagggcaaattgagaag
gatgttaggattgatgttgtcaacattatttgcacttcgatgttcaatttaatccaagat
gtgaacaatatcagtgtggtctccaattttttcaaaatgttggcagaatttttgaattgt
gcaccttctcatgtctttgagttggcactgaaatctcccgtcttcgcaacagaaataaat
ggtccatcaagtggttcatggtttctttcatgtggtcttgccaagatgttttttgctgcc
tgtgaagaggagagggattgctgcctattgacaatttcagtgctagatttcattattcag
gttttagagaaaggggcagaggatagtgtgctttctgcacttatcgaattttttcttcaa
tttgtcctggttaatcatatgcactggaagtacaaaaaacattctcgttggaaagcaact
ctcaagattttggaattgctgagaagttgtattaaaactatcccagtttctagtacgctt
ggtggcatcattcaggacattttactgtatgattcatcagttcacaacattcttttgcgg
attatgtttatgtcaacacaatcattagagatgttatatgctagtcaccatcgtgagttg
aaggagatagaggatctacaccttgtcatctgtttggcacttgacattgtacattccatg
ttggctgctctgtctgaggaatcttttacggatcagccagcctttgtcaatatggttctg
tcatcagcatcaaaacctatgccgttcattacagctgtgacatcattagtttcgttcttc
cacaatcctgcaatacaagcagctgcttcaagagtattttccaaaatatgttttatagct
tcacgaatacagtccatggagaatgctaatcttgttgctgatgctatgcagaatagcaaa
ctaagagcggctatctattgcattttggaagggaaaaaaaaccaagatgataccttaatt
gttagcatgttcaacctcctgcattctgctgcttgttatcagcctgctctccttgtttca
ttgatattgaaggaggaaaatgcaaagacagaattaaatgcaaatggcaatacggatcaa
ctggctgccagtcctattatccagatttcaagctctaaggatgctaaactaattgaccta
attatgaaatatattgaaagatccaaggatctgtttaatagttttcctcgtttactgttg
agtgtccttgacctcctgaaggcattttgggaggggggtctccaatatgttgatatttta
gagaggattagaagcaccaaaaacttctgggagaacttgtcagcatgtatatcttctatc
cctgataggaacgtttttccagttggaagtcagaatgatgatgatagccagtacatctct
ataaggtacctttgccagggtacagtgttagagatcatggcatgtgaattgttcctgcag
aaaagacttcaagatgagaaacctgcaaagaagactcgttctttggatggtcaaattaga
tcatcaaatatgctcgactcagaaggtattttgaaaacctggtgccacagttctattatg
gaatccctaataaagtcttactcatccactggatatgacagagagcttgttcgacaagct
aaggttgtcgtttgcctttgcattgtgcatctaataacaaaggtatcaactggtgatatg
ggaagcttgtccatgccactagttaagcagttacatgtcatatccgctaagttgagccaa
catcctgcattttctgctcttctatcacaatattcattatgtgggtatagtggtagaaaa
gaactcagcaatcttgtaatgaatgatctttattaccatctacaaggagagcttgaaggt
cgtgaaattacgtcaggtccatttcaggagcttttacatttcctactttctttagaagct
tttcagaatgaggagcggagaaaggataagagctccgcacaagttgtcaaggactcttgt
atgtttgatgttttacacatacgacgcgaactcgggattgatttatggtgttattctggt
tctggttggaaggaatccaaagaaatagctgagaagatgttaatgattatccataatgca
aatttgatgatgtcggaatcagcttcaaagcattttgctttgaaatctttaatagcagct
ttatctgtctacatgggaagaagtgatgaacggaagtcgaaattacttgttgaagggatg
tctgaccagctcgtcttatcaggtatccgatatgtttgcaagactctgcaggaaacagta
gattcagcaattccacattctaacacgaatgaggttttgcttcagttcctttcagctcat
gctgaactgttacttactctcacaagaatccattttgagcaaaggaaatgcaggagagag
ttctttcctatccttgcacttcttataaaaacttcaggatcagtcattcaaattttatct
gatatcaggccattcaatctggcccctaacaaagtagtgaagcttcttcttatgttactt
ctgacttcacttcggttcacttattctgtagagaatatgaaagatgaacctgatcttgaa
ttaaacctcttttctgaagtgtctatttcaagtattggagtgttacctgttctctgcaag
tatgcagagaacagtgaatactctaacccctctgtggcatcattggatttaatgctgaag
ggttatttgactcctaatatttggtttcccgtcctacaaaagcaccttcgactacaggtt
atcctccgaaaggttctaatgaaggacgcttcagtttctgctcatgtgatctttaatttt
tgtttgaccttggcgcgcacaaaagatggtgctaagatgcttcatttggctgatattttt
tcttccttaaaggtgcttttaagtcagctaaatattggtgatcctttacttagtgatgga
actagcagtattagccaaggaaagcatgtgcacctctggcaacttggcttggctattatg
acatcagtgatttattgcattggtgatgattcttatatagatattgtggacaattcaata
cgttttctttcggagaaggcacacattattttttccttttctctttctgcaccaaatgtt
cctgttgatgatcagagcaagaatagaggaatactccaaaaatcaaagacatcccttgga
gatctgattctaactgaacacactctcatgctaatatgtgagcttgcaaaacatcacgct
ttgtggagcatgggtatgaaggaaataacttctggactaaatgagacaattatccacctt
ttagcctttataagcaagggaaatttgagaggtggagagtcctcgaatttcaacttacat
tttgaatgtccaccaactgtcaaggaggaggtggactttgatgagattccatcagcaatg
aaaagtaaacaaggatggttttctctctctctctgttccatgagaaatgcaactgtttct
gatcagacacatgcaggattgccattagttaacaaagatcaggctaatgaagattctgat
ttggtttggccaactctttttaccaacatggttgctacacagatttataaaattgctttt
ctaattttgaagttcctgtgcatgcaagctaaagcagcagttaaaagggcagaagaggtg
gcttttattgatcttgcccatttccctgagcttcctatgcctgagattctgcatggatta
caggatcaaacaactgccataatcactgacatgtgcgagggcaacagatcaaaatgtctt
cctgtggaaacagagaatgtgtgcctcctgttgttacagattctggaaaaatctgtgtac
ctggaattttgtgtatcccagtcttgtgggatccgaccagttttgggtcggattgaagat
ttttccaaggaaatcaaagctatgatgcatgtggctgaacagcactcaaaattcaaatca
tcgctgaagtcactaaagcagataatagctcttcaatacccagaattgttacatcagtaa

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