Typha angustifolia (narrow-leaf cattail): 140760930
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Entry
140760930 CDS
T11061
Name
(RefSeq) probable beta-D-xylosidase 2
Organism
tang Typha angustifolia (narrow-leaf cattail)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
PEP_hydrolase
Motif
Other DBs
NCBI-GeneID:
140760930
NCBI-ProteinID:
XP_072954134
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Position
6:complement(join(6273512..6274110,6274192..6274608,6274713..6275063,6275390..6275487,6275593..6275762,6275842..6276141,6279217..6279627))
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AA seq
781 aa
AA seq
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MAKSTLLLHLHILLLFISSSSSSAAAAASRPAFACATGSPAASLPFCRTSLPIRARVRDL
VGRLTREEKVKMLVNNAAGVPRLGIAGYEWWSEALHGVSNVGPAVRFGGAFPGATSFPQV
ISSAASFNASLWELIGIAVSDEARAMYNGGQAGLTMWSPNVNVFRDPRWGRGQETPGEDP
TVSGRYAAAYVRGLQQPYGGKGSHGHNRLKLAACCKHYTAYDLDNWKGVDRFHFNAVVSK
QDLEDTFNVPFKTCVVEGKAASIMCSYNQVNGIPSCADPDLLRNTIRGQWGLNGYIVSDC
DSVGVLYNDQHYTSNPEDAAADTLKAGLDLDCGPFLAQYTESAVQKGKATDGDIDSALTH
TVAVQMRLGMYDGEPSQQPFGNLGPNDVCSSTHQELAVEAARQGIVLLKNHKRALPLSTT
NLRTVAVIGPNSDATVTMIGNYAGVPCGYTSPLEGIGKYVKTIHQMGCTTVACTGENQPI
DAAVDAARKADATIMVVGLDQSIEAEMRDRESLLLPGRQQELVLKVAAASQGPTILVLLC
GGPIDVTFAENHRKIKAILWAGYPGQAGGAAIADVIFGAYNPGGKLPVTWYPEDYVEKVP
MTTMAMRADSSKRYPGRSYRFYTGPVVYPFGHGLSYTTFSHSLARAPVEFAVPVNGRRRA
DYINSAESNRTVRVTHTRCDGLHVPIHVDVKNVGERDGTHTVLVYSSPPTGHSAPAKQLV
AFEKVHVAAGSQVRVIMGIDVCRDLSFASVEGIRRIPIGDHSLQIGELTHSISLRAEGLR
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatccaccctcctcctacatctccatatcctcctcctattcatctcctcctcc
tcctcctccgccgccgccgccgcctcccgcccggcattcgcttgtgccaccggatcgccg
gcggcgtcgctccccttctgccggacgagcctcccgatccgggctagggttcgggatctg
gtggggcggctgacgagggaggagaaggtcaagatgctcgtcaacaacgccgccggcgtg
ccgcgcctcgggatcgccgggtacgagtggtggtcggaggcgctccacggtgtctccaac
gtcggaccggccgtccggttcggcggcgccttccccggcgccaccagcttcccccaggtc
atctcctccgccgcctccttcaatgcctcgctctgggagctcatcggaattgccgtgtcc
gatgaggcgcgggcgatgtacaacggtggccaggcgggcctgacgatgtggagcccgaac
gtgaacgtgttcagagacccacggtggggccgcggccaggagacccccggcgaagacccc
accgtctccggtcgctacgccgccgcatacgtgcgcggcctccagcagccctacggcggc
aaaggatcccacggccacaaccgcctcaagctcgccgcctgctgcaagcactacaccgcc
tacgatctcgacaactggaaaggcgtcgaccgcttccacttcaatgccgtggtaagcaag
caagatttggaggacaccttcaacgtcccgttcaagacttgcgtggtggaaggcaaggca
gcgagcatcatgtgctcctacaaccaagtcaacggcattcccagctgcgctgacccggac
cttctacgtaatacaattcgtggtcaatgggggctcaatgggtatatcgtctcagattgt
gattcagttggtgttctctacaatgatcaacattacacgtccaacccggaagatgcagcg
gcagacacacttaaagcaggtttggatctggactgcggacctttcttggcgcagtacacc
gagagtgcggtgcagaaaggaaaggccaccgatggtgatatcgactcagcgttgacacac
acggttgccgtccaaatgagactggggatgtatgatggcgagccatcacagcagcccttc
ggcaacctcggcccaaatgatgtttgcagctcgacccatcaagagctcgccgttgaggca
gctcgccaagggattgtcctcctcaaaaaccataaacgagctctgccattgtccaccact
aacctccgcactgtcgccgtcattggtccaaactcggatgccaccgtcacgatgatagga
aattatgccggtgttccctgtggatatacaagtcctcttgaagggattggaaagtatgtg
aagaccattcaccaaatgggctgcactactgtggcttgcaccggcgaaaaccaacccatt
gacgcggcggtggacgcggcccgcaaagctgacgcgacgatcatggtcgtcgggctcgat
caatccatcgaggccgagatgagggatcgtgaaagtctccttctccctggtcgtcagcag
gagctcgtcttaaaggtggcggcggcttctcagggtccgaccattttggtcctcttgtgt
ggtgggccgatcgatgttacattcgcggagaatcatcgcaagatcaaggccattctttgg
gccgggtatccaggtcaggccggaggcgccgcgattgcagacgttatatttggtgcatac
aaccccggtggaaagctaccagtgacatggtaccctgaggactatgtggagaaagttccc
atgaccaccatggccatgcgtgctgactcgtctaaacgttatccaggccggtcgtatcga
ttctacactggcccagtagtatatccttttggtcacgggcttagctacaccacattctcc
cactccttggctcgagccccggttgagtttgccgtcccagtcaacggtcgccgccgagcc
gactacatcaactcagccgagtcgaatcggacggttcgcgtcacccacacacggtgcgat
ggccttcacgtccctatccacgtagacgttaagaacgtcggggagcgcgacggaacccac
accgtgcttgtctactctagcccgccgactgggcactcagcgccggctaagcagcttgta
gcattcgagaaggtccacgttgcggcaggatcacaggttagagttataatgggaatagac
gtatgtagggatctcagctttgccagtgtggaggggatccgaaggatccctatcggcgat
cacagccttcaaatcggtgagttgacgcactcgatctcgctaagggctgaagggctgagg
gtataa
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