KEGG   Typha angustifolia (narrow-leaf cattail): 140760949
Entry
140760949         CDS       T11061                                 
Name
(RefSeq) protein HASTY 1
  KO
K14289  exportin-5
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140760949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140760949
   03036 Chromosome and associated proteins [BR:tang03036]
    140760949
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    140760949
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     140760949
SSDB
Motif
Pfam: Exportin-5 Xpo1
Other DBs
NCBI-GeneID: 140760949
NCBI-ProteinID: XP_072954166
LinkDB
Position
6:join(5621745..5621855,5624886..5624987,5627621..5627764,5627867..5627947,5628065..5628134,5628270..5628340,5628458..5628621,5628690..5628761,5628857..5629094,5631353..5631415,5631516..5631800,5632910..5633023,5633158..5633284,5633371..5633540,5633652..5633753,5635376..5635479,5635598..5635889,5636046..5636284,5637235..5637738,5637864..5638158,5638414..5638597,5640465..5640544)
AA seq 1203 aa
MEDGNTTATNVARAIAATMDWSSPPDARKAAVAYLESVKSGDIHILANASLLLVQKDWSS
EIRLHGFKLLQHLVRFRWDEFSISERKEFANFTIKLITEVVGPHEEWALKSQIAALVAEV
VRREGVTLWHELLPSMVSLSNKGLIEAELVAMILRWLPEDITVHNEDLEGDRRRVLLRGL
TESLTEILPLLYSLLEKHFVAALSEYSRQNMDLAKQHAAIVTSALNAVNAYAEWAPVPDL
AKHGLIHGCGSLLPYNEFRLHACEFFKFVCQRKRPLDATAHEFDSAMTTIFQILINVSRD
FLNKCNSNTGALDESEYEFAECICESMVALGSSNMQCLLVDGNITSQFLQQMLEYYQHYK
IALHFQSLLFWLVLLREPSAKAKSSAQISGDNSSVCNVGFGGPTEKEKKRVLASITDEIF
SSILDISFQRMLKKNNTTGPKTSGESFELWSNELEGKSDFSQYRSRLLELIRLIASQKPF
IAATKVSQRIDTLTRNANYISMSPQELAIMESIQLGLETVVSAIFDGSPESVSSDPETKF
QLHRIFEALLQQLLSLKWTEPTLAVILGHYLDAFGPYLRHYPDSVASLVNKLFELLTSLP
FNLQDPSLNNARHARLQICSSFIRVSRAADKSLLPHMKGIADTMSYLQGEGRLLRGEHNL
LGEAFLVMASSAGIQQQQEVLAWLLEPLSKMWTQLEWQNAYLSDPFGLARLCSDVQFMWS
IYHTVTFFEKALKRSGSKKANMNLQGSPAQSTYVHPVSHHLSWMLPPLLRLLRSVHSLWS
EPIAQALTGELKAAKSMSSVEQASLLGETNIKLSKVHSASSDGSSVDTSREGDSKETDIR
NWLKGIRDSGYNVIGMSATIGDSFFRCIQGSSMILTLVENVQSMEFRHLRQLIHLVLVPL
VKYCPVDLWEEWLVNLLYPVFLYCQQALTHSWSSLLHEGRTKVPDTFGNHSGLELKVEMM
EEKLLRDLTREVCSLLSVLALPSLNSNLPSLEQLGPINRAEAPLLKDLESFASNSVTGFL
VMHKGPALPALRITIEVFTWTDGEAVTKIVPFCGALILLAISTNDLELREFVAKDLFFAV
IQGLALESNAIISADLVGLCREIYVYLSDRSPAPRQVLLSLPHITKDDLLSFDDALSKTS
SPKEQKQHMRSLLVLATGNKLKALAAQKSTNVITNVTARTRSLATISGPSVEDDGVIGLA
AIT
NT seq 3612 nt   +upstreamnt  +downstreamnt
atggaggacggcaataccaccgccaccaacgtcgcccgggccatcgccgcgacgatggac
tggagctcgcctccggatgcccggaaggccgccgtcgcctacttggaatccgtgaagagt
ggagatattcacattttggcaaacgcatcacttcttttggttcagaaggattggtcatca
gagattcgactgcatgggtttaaattgctgcagcatttggttagattcaggtgggatgaa
ttcagcatatcagagaggaaggaatttgcaaattttacaattaaattgattacagaagtg
gttggtcctcatgaagaatgggctttaaagagtcaaatagctgctttagtcgccgaggta
gttaggagagaaggagtaactctgtggcatgagctgctaccttctatggtttctctatcc
aacaaaggtctgattgaggctgagttagttgccatgattctaaggtggcttccagaggat
ataacagtacataatgaagacttagaaggtgatcgacgaagggtattattacgtggtctt
actgaatctttgacagagatattgccactcttgtactctttgcttgaaaagcactttgta
gctgctttaagtgagtattctagacaaaatatggatttggctaaacaacacgcagccata
gtaacatctgctctcaacgcggtgaatgcctatgctgaatgggctcctgtgcctgatctt
gcaaaacatggtctcattcatggatgtgggtccttgcttccgtataatgagtttcgtctc
catgcttgtgaattttttaagtttgtctgtcagaggaaaagacctcttgatgccacagca
catgagtttgattctgcaatgactaccatttttcagatcttgataaatgtatcgagagat
tttttaaataagtgtaattcaaatactggtgctttggatgaaagtgaatatgagtttgca
gagtgtatatgtgagagtatggtagctttggggtcttctaacatgcaatgcctccttgtg
gatggaaatataacatctcagtttcttcaacagatgctggaatattaccaacattacaag
attgcgcttcattttcaatctttgctcttttggctggtattgctgagagaaccatcagca
aaagcaaaatctagtgcacaaatttctggggataactcttctgtttgcaatgtggggttt
ggtggaccaacagaaaaggaaaagaaaagagtgttggcatccattactgatgaaattttc
tcttctattctggatatttctttccaaagaatgctcaagaagaacaatacaacaggacct
aaaacatctggagaatcatttgaactatggagcaatgagcttgaaggaaaaagcgatttc
agccaataccgttctagattgttggagctcatcagacttattgcttctcaaaagccattt
atagctgcaacaaaagtttcacagagaattgacacacttacaagaaatgcaaattacata
tcaatgtcccctcaggagttagcaataatggaaagcatacaactaggccttgagacagtc
gtgagtgcaatattcgatggttcacctgaatctgtaagcagcgatcctgaaaccaagttt
caattacacagaatttttgaagcactacttcagcagctcctttctttaaagtggacggag
ccaacactggcagtaatccttgggcactatttggatgcatttggaccatatttgagacac
tatccagattcagttgctagtcttgtgaataaactttttgaacttttgacatcacttccc
ttcaaccttcaggacccttctttaaataatgcacgacatgctcggttgcaaatttgttca
tcctttattcgtgtatcgagagctgctgacaaaagtctgcttcctcatatgaagggtatt
gctgacactatgtcttatcttcaaggagagggtcgtctacttcgtggagaacataatctt
ttaggcgaagcatttcttgtaatggcatcttctgctgggattcaacaacaacaagaagtg
ttggcctggttgcttgaacctttgagcaaaatgtggactcaattagagtggcaaaatgca
tatttgtctgacccatttggtttggcacgtttgtgctctgacgtgcaatttatgtggtca
atttaccacactgtaacattctttgaaaaggcactcaaaagaagtggaagcaagaaggct
aatatgaatttgcaaggaagcccagcacaatccacttatgtgcatcctgtatctcatcat
ctgtcttggatgcttcccccacttttacggctgcttcgatctgtgcattctctttggtct
gaaccgatagctcaagctctcacaggagaattaaaagcagctaagagtatgagttctgtt
gagcaggctagtcttctgggagaaaccaatattaaactgtcgaaagttcattcagcatct
tctgatgggtcttcagtggacacgagcagggagggagactcaaaggaaactgacataagg
aattggttgaagggtatccgagacagtgggtataatgttataggcatgtcagcaactatt
ggggattcatttttccgatgcatccagggatcttctatgatacttactcttgtagagaat
gtgcaatcaatggaattcagacatttacgccaactcattcacttagttcttgtgccttta
gtcaagtactgccctgtagatctatgggaagagtggcttgtaaacctcttgtacccagtg
tttctctattgccagcaagctcttactcattcatggtctagtcttctacatgaaggccgc
acaaaagtgccagatacctttggtaatcattctggattggagctgaaggtagaaatgatg
gaagaaaagttactgcgtgatttgactagggaagtatgttctctactctctgttttggcc
ttgccaagcttaaatagcaacctcccctccttggagcaacttggacctatcaatcgtgca
gaagctcctttgctcaaagatttagaatcatttgcttcaaactctgtcaccgggtttctt
gtgatgcataaaggtcctgctcttcctgcactaaggataactattgaagtatttacttgg
acagatggtgaagcagttactaaaattgttcccttttgtggagctcttattctacttgcc
atttcaacaaatgatcttgaactaagagagtttgttgccaaggatttattttttgcagta
attcaaggcctagccctcgagtcaaatgcaatcataagtgcagatcttgttggtctttgt
cgtgaaatatatgtctatctatcagatagaagccctgcacctagacaggtcctgctctcc
cttcctcatatcacaaaagatgatttactaagctttgatgatgctttgagtaaaacgagc
agccctaaagaacaaaagcagcatatgcggagcttgcttgtattagctacaggaaataaa
ttgaaagctcttgctgctcaaaagagtacaaatgttattactaatgttacagcaagaacc
cgcagtttggccacaatttctggacccagcgttgaagatgatggtgtcattggattagca
gcaataacttga

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