KEGG T11061: 140761004

Typha angustifolia (narrow-leaf cattail): 140761004

Entry

140761004         CDS       T11061

Name

(RefSeq) DNA-directed RNA polymerase III subunit 1 isoform X1

K03018

DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]

Organism

tang Typha angustifolia (narrow-leaf cattail)

Pathway

tang03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140761004
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140761004
Enzymes [BR:tang01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     140761004
Transcription machinery [BR:tang03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     140761004

SSDB

Motif

Pfam:

RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4

Other DBs

NCBI-GeneID:

140761004

NCBI-ProteinID:

XP_072954261

LinkDB

Position

6:complement(join(7657371..7657422,7659069..7659271,7659387..7659591,7659846..7659913,7660012..7660128,7660212..7660367,7661757..7661908,7662713..7662860,7663669..7663944,7664018..7664221,7665037..7665135,7666921..7667112,7667527..7667761,7668595..7668688,7670528..7670720,7672597..7672785,7674887..7675027,7675116..7675257,7675333..7675481,7675559..7675759,7676725..7676824,7676954..7677066,7677181..7677362,7678465..7678621,7678715..7678864,7681424..7681553,7681655..7681725))

AA seq 1372 aa
MARPEEKLRCTKEPYIEDVGPKKIKSIRFSMFSGEEVKKSAEVQVWNNRIYGADLKPVEN
GLLDQRMGAANKAGQCVTCHGKFTDCPGHFGYLKLVLPVFNVGYFNSILDILKCICKNCS
RVLLVEKDRKEYLRKMRNPKTEILQKNALVKKIRDKCKISRCPWCGYVNGVTKKAKSQLA
IAQDFPKASDRSIEEFRSALSHKKDKVSFHVVHLLSPVKVLALFRRMLDEDCELLNLYDR
PEKLIVTAIAIPPVTIRPSVFVGFGRSSNEDSITSILKNIINTNSILREDLEAGAPPHKS
LDCWAHLQIQVVEYINSEAPCVPDSIHRGLVQRLKGKQGRFRGNLSGKRVEYTGRTVISP
DPNLKITEVAIPVLMARVLTYPERVSYYNIEKLRQCIRNGPNKHPGANFIILPDGTKLHL
KYVDKKIAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESV
CNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLI
TRKDTFYDRAAFSLMCSYMGDSMESIDLPTPALIKPIELWTGKQLFSVLVRPNASTRVFL
NFTLKEKIYTKLETMCPCDGYVYFRNSELICGQLGKTTLGNGNKDGLFSVLLRDYNSHAA
ASCMNRLAKLSARWIGNHGFSIGIDDVQPGEELNQQKKKKIDEGYRECHELISSYSKGEL
TLQPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGSPINISQMI
ACVGQQSVGGRRAPNGFINRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGRE
GLVDTAVKTAETGYMSRRLMKGLEDLSVYYDQTVRNASGGVVQFLYGDDGMDPAKMEGKD
GIPLNLDQLFMKVMATCPHRGQDPLSPLEISQVVDDRLSKYDMSPEGGCSAAFKKLLLDF
LQKHVLLLRNTRRALQLDEDNVGKKASNLTESIAANISGISSKQLQVFLETCISRYHLKK
VEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIIT
ATLLSDRDVLSARIVKSSIEKTVLGEVAKTVKIVLKSSQPYITVQLDMDRIEALHMRISS
ETVQLSILNHPKIKLKPEHIRILSNNKLRIYPPETDKRKLQFELHSLEAMIPKVIVKGIP
TVERAVINNTNGVYNLLVEGTNLLAVMGTPGIDGSKTRSNHVIEVQQTLGIEAARQCIIN
EIQYTMRNHGMSIDTRHMMLLADLMTYKGEVLGITRFGISKMKDSVLMLASFEKTAEHLF
NASYSGREDQIEGVSECIITGIPMQLGTGILKVRQRLDQLPEFKYQPDPIIC

NT seq 4119 nt +upstreamnt +downstreamnt
atggcgcgtccggaggagaagctgaggtgcacgaaggagccttacatcgaggacgtcggc
cctaagaagataaagagcatcaggtttagtatgttttcgggcgaggaggtaaagaaatcg
gcggaggtccaggtctggaataataggatttatggggcggatctgaagccggtggagaat
ggcttgctcgatcaacgaatgggagctgcaaacaaagctggacagtgtgttacctgccat
ggaaaatttactgattgtcctggacattttggatatctaaaacttgtgctccctgttttc
aatgttgggtacttcaattctattttggacattctgaagtgcatatgcaagaactgcagc
agagtacttctcgtagagaaagatcggaaagaatatttgaggaaaatgagaaatcctaaa
acagaaatactacagaagaatgctctcgtgaaaaaaattagagataaatgcaaaatatct
cgctgcccatggtgtgggtatgtaaatggtgtgactaagaaggccaaatctcagctggcc
attgctcaggacttccctaaagcttccgacagaagtattgaagaatttcgatctgcattg
tctcacaaaaaggacaaagtatctttccatgttgttcatttattaagccctgttaaggtc
cttgcacttttcagaagaatgcttgatgaggactgtgaattgctcaatctttatgatagg
ccagagaaacttattgtaactgcaatagcaataccacctgtgacaatccggccttccgtc
tttgtgggttttggaagatcaagtaatgaggacagcattactagcatattgaagaatata
attaatacaaattctatccttagggaagatcttgaagctggtgctccaccacataaatct
ttggattgttgggcacaccttcaaattcaagttgttgaatacataaatagcgaagctcct
tgtgttcctgattcaatacatcgcgggcttgttcagcggcttaaagggaagcaaggacga
tttcgtggtaacttgtctggaaaacgtgttgagtatactggaaggactgttatctctcct
gatccaaatttaaaaattactgaggtggctattccggtattaatggcccgtgtcttgaca
tatccagaaagggtttcttattataacatagagaaattacggcagtgtattcggaatgga
cctaacaaacatccaggagcaaattttattatactacctgatggaactaagttgcactta
aaatatgtggataagaagattgctgctagtgaattgaaatatggctatatagttgaaaga
cacttagaagatggagatgttgtcctcttcaatagacaaccaagcttgcataggatgtct
ataatgtctcatcgggcaaggatcatgccttggaggacactgaggtttaatgagtccgtt
tgcaatccatacaatgctgattttgacggagatgagatgaatttacatgttcctcaaaca
gaagaagctcgtacagaagctcttatgctcatgggggtacaaaataacttatgtacccca
aagaacggtgaaattttagttgcatccacacaggactttttgacatcatcctttctgatt
acaagaaaagacaccttctatgatagggctgccttttctctaatgtgttcttacatgggt
gattctatggaatcaattgatttaccaacacctgcattgattaagcctatcgagctttgg
acagggaagcagctatttagtgttctggtgcgccctaatgcaagtacaagggtgtttttg
aattttactcttaaagagaaaatttataccaagcttgaaacaatgtgtccctgtgatggt
tatgtgtatttccggaacagtgagcttatatgcgggcaacttggaaagacaactttagga
aatggaaacaaggatggtcttttctctgttcttctgagagattacaattcacatgctgct
gcaagttgcatgaatcgattagcaaaattgagtgctaggtggatagggaatcatggattt
tcaattggcattgatgatgttcaacctggagaagaactaaatcagcaaaaaaagaagaaa
attgatgaaggttatagagaatgtcatgagcttatttcctcgtacagcaaaggtgaactc
actttgcaacctggttgtaatgcggctcaaaccttggaacttaagataactggtgtgctg
aatcaaattagagcaacagctggaaatgtatgtatgaatgaacttcattggaggaacagc
ccattaattatgtcacagtgtggatcaaaaggttctccaatcaatatcagtcagatgatt
gcatgtgttggccagcaatcagttggaggacgtcgtgccccaaatggctttataaatcga
actcttccacacttccccataaattcaaagacacctgctgctaaaggttttgttgctaat
tcgttctacactgggttgacggctactgaattcttcttccatacaatgggtggacgagaa
ggtcttgttgatacggcggtcaaaacagcagaaactggatacatgtcccgtagattgatg
aaaggcttggaagatctctcagtttattacgaccaaacagtgcgcaatgctagtggtggg
gtagttcagtttctttatggagatgatggcatggatccagcgaagatggagggaaaggat
ggcatccccttaaatttggaccaattatttatgaaagttatggctacatgccctcataga
ggacaggatcctttatctccattagaaatttcacaagttgtagatgacaggctctcgaag
tatgatatgtctcctgagggtggttgctctgctgctttcaagaagttgttattagatttc
ttacagaaacatgtccttttgttgagaaacaccagaagagcacttcagctcgatgaagat
aatgttgggaagaaagcctctaatttaacagaaagtattgctgctaatatttctggaatt
tcgtctaagcaacttcaggttttcctagaaacctgtatatctcgctatcatttgaaaaaa
gttgaagcaggagcagcaattggagcaatcggagcccaaagtataggagaaccagggaca
cagatgactctgaaaacatttcactttgctggagttgctagcatgaatgtcactctgggg
gttcctcggatcaaggaaataataaatgcagcaaaaaacataagcacaccaattatcaca
gccacacttctctctgatcgtgatgtattatctgctcgtatagtgaaaagctcaattgag
aaaacagtgctgggtgaggttgcaaaaactgtaaaaattgtcttgaaatcaagtcagcca
tatataactgttcaacttgacatggaccgaattgaagccttgcatatgagaatttcttct
gagactgtacaactttcaatattgaatcatccgaagataaaattaaaacctgagcatatt
cgtatcctaagcaacaacaagctgcggatatacccacctgaaacagataaaagaaaactt
cagtttgaactgcactccttagaggccatgattccaaaggttattgtgaagggtatccca
actgttgagcgtgcagttattaacaacaccaatggagtatacaacctcctagttgaaggc
acaaaccttctagcagtaatggggactcctggaattgatggaagtaaaacaagaagtaat
catgtcattgaagtccagcagacacttgggattgaagccgcgaggcagtgtatcattaat
gaaattcaatatacaatgcgtaatcacggcatgagcattgatacaaggcatatgatgctt
ctggcagatttaatgacttataagggcgaagttcttggaatcacaagatttggcatttca
aagatgaaagacagtgttttgatgctggcatcatttgaaaaaactgcagaacatcttttt
aatgcttcatacagtggtagggaggatcagatagagggagttagtgaatgtattataacg
ggtataccaatgcagctgggcactggaatcctcaaagttagacaaaggcttgaccagcta
cctgaatttaaataccagcctgatccaattatatgttga

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