KEGG   Typha angustifolia (narrow-leaf cattail): 140761030
Entry
140761030         CDS       T11061                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140761030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140761030
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     140761030
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  HECT type E3
   140761030
SSDB
Motif
Pfam: HECT TPR_TRIP12_N ARM_ARMC5 HEAT_2 HEAT_EZ PSP
Other DBs
NCBI-GeneID: 140761030
NCBI-ProteinID: XP_072954297
LinkDB
Position
6:complement(join(4587650..4587715,4587789..4587911,4587996..4588124,4588216..4588284,4588371..4588451,4591434..4591538,4591630..4591860,4591963..4593537,4593799..4593894,4594454..4595879,4595970..4596091,4596185..4596433,4598396..4598557,4598632..4598799,4598934..4599050,4599177..4599287,4599867..4600739))
AA seq 1900 aa
METRSRKRAEASSSQAPTTRSSKRSRTSSSASSVAAAAPNPPTTRSRRSAAAAAAAAAAP
MDSAGDSSSGRRRASGGRGHSWAAEKGKEQEPPEASRSRDRDRERERDRDAERILGLRFD
AAGAAASAAADDDNDSEGGVSILHQNLTSASSALQGLLRKLGAGLDDLLPSSAITASSLS
QQSGRLKKILSGLRAEGEEGKQVEALTQLCEMLSIGTEESLGSFSVDSFVPVLVGLLNHE
SNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVPCFCARLLTIEYMDLAEQSLQALKKIS
QEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNL
LNYHDAKVLEHASVCLTRIAEAFASLPDKLDELCNHGLVAQAAGLISISNSGGQASLSTS
TYTGLIRLLSTCASGSAIGAKTLLLLGVSGTLKDILSGSGLVAGASVSPALTRPPEQIYE
IVNLADELLPPLPQGTISLPICYSTLVKGSYAKKSPASTSVKQDDTSGTENEISAREKLL
RDQPELLQQFGMDLLPILTQVYGSSINGPVRHKCLSVIGKLMYFSSADMIQSLLGTTNIS
SFLAGILAWKDPQVLIPALQIAEILMEKLPGTFSKMFVREGVVHAIDALICSDSSSATPS
QASVPEKDNETSPGTSSRSRRYRRRSGGLNNENSSLDESKGSVTGLAVSPPTSVEVPTSS
SSLRSAVSVCARSFKHKYFSSDSGSNEVGVADDLLYLKNLCAKLNASVENVRVKAKGKSK
ASGVNSFDIASSGEEQLDGVISEMLAELSKGDGVSTFEFIGSGVVLSLLNYLSCGTFGRE
KISEADLPKLRQQALKRYKSFIAVTLPFESKEGTGNPMSVLVQKLQNALSSLERFPVVLS
HSGRSSGGGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAVEEFL
WPRVQRSDSGQKPSVVAGNSESGAAATGAGASAAATSTPSGRRSSTRSRSSVTIGGTTKK
DAPEGSASSSKGKGKAVLKSTPDETKGPQTRNAARRRAASDKDVEMKPAHGDSSSEDEEL
NISPFEIDDALMIDEDDISEDEDDDHDEVLQDGSLPICVPEKVHDVKLGDAADDANVASS
TSDSQTQPSSGSSNRNVSSRGSESAEFRSGSNFGSRGAMSFAAAAMAGLASVSGRGIRSG
RDRRALGSSANENYNKLIFTAGGKQLSKHLTIYQAIQRQLVLDDDDDEKLNGSDLPNDGS
RFWSDIFTLTYQKADSQADRASQGGPTSLAPKSKSGSYSKSSSDTRWQQTSLLESILQGE
LPCDLEKANPTYNILALLRVLEGLNQLAPCLRVQAVSDNFAEGKVTSLDELYRTGPKVPS
EEFVNSKLTPKLARQIQDALALCSGGLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSR
ALHRLQQQQNADNHNSASEREVRVGRLQRQKVRVSRNHILDSAAKVMEMFSSQKAVLEVE
YFGEVGTGLGPTLEFYTLLSHDLQKVSLGLWRSNHAGDNSAMEIDGNGMNDDGPEMKKQN
SDLLVGSRDLVQAPLGLFPRPWPPNADDSDGSQFCKVVEYFRLVGRVMAKALQDGRLLDL
PLSTAFYKLVLGQELDLYDILSFDADFGKILQELQVLVYRKQFLESTPGDNKQAIADLRF
RGSPIEDLCLDFTLPGYPDYVLKEGEESTIVDIHNLEKYISLVVDATVNTGITRQVEAFR
AGFNQVFDVTSLQIFSPHELDYLICGRRELWEPDTLADHIKFDHGYTAKSPAIVNLLEIM
AEFNPDQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKHSSTATNTTSNGTGVSEAADDD
LPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq 5703 nt   +upstreamnt  +downstreamnt
atggaaacgcgcagccgcaagcgggcggaggcctcgtcttctcaagcccccaccacccgc
tcttctaagcgctcacgtacctcttcttctgcctcctctgttgctgccgctgctccgaat
cccccaaccactcgttcccgccgctctgctgctgctgctgctgccgccgccgctgctccc
atggactccgccggcgattcctcctccggtcgccgccgcgcctccggtggccgaggccac
tcttgggctgccgagaagggtaaggagcaggaaccacctgaggcatcccgctcccgcgat
agagacagagagcgagaacgagaccgtgatgccgagagaatcctagggttgcggtttgat
gctgcaggtgctgctgcctctgcggccgctgatgacgataacgacagcgagggaggcgtt
agtatacttcaccagaatctcacgtcggctagcagtgcactccagggcttgctaagaaag
cttggtgctgggctcgatgatcttctgccgtcgtcagccatcacggcttcttcgttatcg
cagcagagcgggcggctgaagaagatcctctcgggtttaagggctgaaggggaggaggga
aagcaggtggaggcattgacccagctctgcgagatgctgtcaatagggactgaggagtct
ctagggtccttctcggtagactcatttgttcctgtccttgttgggttgctcaaccatgag
agcaatcctgatatcatgctgcttgctgcaagggcgctcacccacctgtgcgacgtgctg
ccatcctcatgtgctgcggtggtgcattatggtgctgtgccatgcttctgtgcccggcta
ttgacaattgaatacatggaccttgctgagcagtcactgcaagctctcaagaagatatca
caagagcacccgactgcttgtttgcgtgctggtgcactaatggcggtgctgtcttatctt
gacttcttttcaactggtgttcagagagtagcattgtccactgctgcaaatatgtgtaag
aaacttccttctgatgcagctgactttgttatggaagcagttccgttgctcacaaacctt
ttgaattatcatgatgcaaaggtgttggaacatgcctctgtttgcttgacacgtattgca
gaagctttcgcctcattgcctgacaagttagatgagttgtgcaatcatggtttggttgca
caagctgctgggttgatatccattagcaattctggagggcaagcttctttgagtacatct
acctacacggggttgatccgccttctttctacgtgcgctagtggatcggccataggagct
aaaactcttctccttttgggagtcagtggcactttgaaagatattctttcaggttctggt
ctggttgccggtgcttccgtgtcacctgctctaactaggccacctgagcagatatatgaa
attgtgaaccttgccgatgagcttcttccaccattgcctcaaggaaccatttctcttcca
atttgctatagtactctcgttaaaggttcatatgcaaagaaatctcctgcaagtacgtct
gtcaagcaagatgacacaagtgggacagaaaatgaaatttcagcacgtgagaagttattg
cgtgatcaaccagagcttcttcagcagtttggaatggacctacttcccattctgacacag
gtgtatggctcaagtataaatggccctgttcgtcataaatgcctttctgttattggcaaa
ttaatgtatttcagctcagctgatatgatacagtctttacttggcacaacaaatatttcc
agcttcttagcaggaattttggcatggaaagatccacaagtactgattcctgcgcttcag
atagcagagattcttatggaaaaacttcctggaacattctccaaaatgtttgtgagagaa
ggggtggttcatgctattgatgcactcatatgctcagactcctcaagtgcgactccttct
caagcatctgtacctgaaaaagacaatgaaacttcacctggaacttcttcacgttctcgg
cgttatcgacgacgtagtggtggattgaacaacgaaaacagctcattggatgagtctaaa
ggttctgtaactgggcttgctgtttcacctcctacttctgtggaagtccctacgtcaagc
tctagtcttcgttctgcagttagtgtttgtgcgagatcgtttaaacataaatacttctct
tctgactctgggtcaaatgaagtaggagttgctgatgatcttctttatctgaaaaatctt
tgtgcaaaactaaatgctagtgtcgagaatgttagagtgaaagccaaaggtaaatcaaaa
gcctctggagtcaattcttttgatattgcttctagtggcgaagaacagttggatggagtt
atatctgagatgctggctgagcttagtaaaggcgatggtgtttccacatttgaattcatt
ggcagtggagttgttttatcattgctaaattatctatcatgcggaacatttggaagagaa
aaaatttctgaagctgatctgcctaagcttcgtcagcaggcacttaagagatataaatct
tttattgcagttactcttccttttgaaagtaaggaagggactggaaatccaatgtcagta
ttggttcagaagctgcaaaatgctttgtcttctttagaacgtttcccagttgtactgagc
cattcaggcagatcatctggtggtggaagtgctcgtctgtcctcaggtttaagtgctttg
tctcaacctttcaagttacgcctatgtagagctcaaggtgaaaaatctctgcgtgattat
tcatcgaatgttgtgctcatcgatccactggccagtctggctgctgtggaagagtttctt
tggccgagagttcagcgcagtgattctggacagaaaccttcggtggtagctgggaactcg
gaatctggagctgcagctactggtgctggtgcttcagcagcagccacatcaactccatca
ggccggcgatcttcaacaagatctaggtcatcagtaacaattggaggtacaactaaaaag
gatgctccggagggaagtgcaagctcttcaaaaggaaaaggtaaagctgttttaaagtct
actcctgatgaaacaaaaggacctcaaacaagaaatgctgctcgtagaagagctgcttct
gataaagatgtagaaatgaagccagcacatggagactctagctctgaggatgaggagctt
aacatatctccttttgagattgatgatgctctgatgattgatgaggatgatatttcagag
gatgaagatgatgatcatgatgaggttttacaagatgggtctcttcctatatgtgtacca
gagaaggtacatgatgtgaaattaggagatgcagctgatgatgctaatgttgcttcttca
acaagtgatagccaaacacaaccttcgtctggatcaagtaatagaaatgtctctagtagg
ggttcagaatctgctgaatttcgtagtgggagcaattttggttcaaggggtgcaatgtca
tttgctgctgctgctatggctggtctggcttctgtaagcggtcgaggcattagaagtggt
cgagatcgccgtgcacttggaagcagtgcaaatgagaactacaataagttgatatttaca
gcaggtgggaaacagctgagcaaacatttgactatatatcaggctatccaacggcagctt
gtgcttgatgatgatgatgatgagaagttaaatggatctgacttgcccaatgatggtagc
aggttctggagtgatatatttacactaacatatcagaaggctgatagtcaggctgatagg
gcatctcaaggaggtccaacttccttggccccaaagtccaaatctggctcttattctaaa
tctagtagtgacacccgatggcagcaaacttcacttcttgaaagcatattgcagggggag
cttccttgtgatttagaaaaagctaaccctacttataacattctggctttattacgtgtt
ctagagggtttgaatcaactagctccttgtttgagagtgcaggcagtttctgacaacttt
gctgaaggcaaagtcactagcttggatgaactctacagaactggacccaaggttccttct
gaagagtttgttaacagcaaattaacccccaaacttgccaggcaaattcaggatgctctt
gcattgtgcagtggtggtcttccttcatggtgttaccaaatgaccaaagcttgccctttt
ctgtttccatttgagacacggaggcaatatttttactccacagcttttggtctgtctcgt
gcattacatcgtcttcagcaacaacaaaatgctgataatcataattcagcaagtgaaaga
gaggttcgagttggccggttgcaacgtcagaaagttcgtgtttccagaaaccatattttg
gattctgctgccaaagttatggaaatgttttccagccaaaaggctgttcttgaagtagaa
tattttggtgaggttggcacaggattaggtccaacgctcgagttttatactcttttaagt
catgatttgcaaaaggttagtttaggattgtggagatccaaccatgcgggggataattct
gccatggaaattgatggaaatggaatgaatgatgatggtccagaaatgaagaaacagaac
tctgatttgcttgttgggagcagggacttggtccaggctcctcttggtctgtttcctcgg
ccgtggcctccaaatgctgatgactctgatggaagtcagttttgtaaagttgttgaatat
ttccgtctggttggtcgagtaatggctaaggccttgcaagatggacggcttcttgacctt
ccactgtccacagcattttacaaacttgtactaggtcaagagcttgatttgtatgatatt
ctctcgtttgatgctgattttgggaagatattgcaagaactccaagtccttgtttatcgt
aaacagttcctagaatcaacacctggtgacaataagcaggcaattgctgatttacgcttc
cgtggttctcctattgaagacctgtgtttagattttactcttcctggatatcctgattat
gttcttaaggaaggagaagaaagtacaattgttgatattcacaatttggaaaaatacatc
tccttggtagttgatgcaactgttaacaccggaattacacgacaggtagaagcatttagg
gcaggtttcaaccaggtctttgacgtcacatctttacaaatattttctccacatgagctg
gactacctaatctgtggtcgcagagaattgtgggagcctgacacactggctgatcatata
aaatttgatcatggatacactgccaagagccctgctattgttaatctccttgagatcatg
gcagaattcaacccagatcaacaacatgctttttgccagtttgtgacgggtgctcctcga
cttcctcctggtggtctggctgcattgaatccgaagctcaccatagtgaggaagcattct
tccactgctacgaacacgacatccaatggaactggagtgtccgaagcagctgatgatgat
cttcctagcgtcatgacttgtgctaactacctgaaacttcctccatactctaccaaggaa
attatgtacaagaagctgctgtatgctattaatgaaggccaagggtcatttgacctgtct
tga

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