Typha angustifolia (narrow-leaf cattail): 140761046
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Entry
140761046 CDS
T11061
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140761046
Enzymes [BR:
tang01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
140761046
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
140761046
Prokaryotic type
140761046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
140761046
NCBI-ProteinID:
XP_072954323
LinkDB
All DBs
Position
6:complement(join(1627606..1627749,1627894..1627965,1634848..1634929,1635461..1635519,1635629..1635665,1635811..1635968,1636124..1636364,1636443..1637149))
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AA seq
499 aa
AA seq
DB search
MASSLTPPPPPAPNPTPVHPGRIRLLSSGAPSPTSTSTSTSGPVIYWMFRDQRIRDNWAI
LHAAQLAASSSSSSPLAVAFTLFPSPFFLSARSRQLAFMLRSLRLLSLHLTSLNIPFFLL
RGDPVLTLPSLLRRLNASALVADFSPLRPFRSSLDAIVREVGNEITVHQVDAHNVVPVWA
ASERLEYAAKTIRPKIHRLLPEYLVEFPDLPRLSSPWIGEEPPGINWDELISEVKREAGD
VREIGWCEPGEDAAMEMLMGRMDGFLTKRIKNYDTDRNDPVKPKGLSGLSPYLHFGQISA
QRCALEAKARRKFSPQSVDAFLEELIIRRELADNFCYYQPQYDSLQGAWEWARKTLMEHA
LDKREHIYTREQLEKAKTHDPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEEALS
TAIYLNDKYEIDGRDPNGYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVDAY
ISYVNRLVSGTKKRKSESL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccttaaccccgcctcctccgcctgccccaaatcccaccccagtccaccca
ggccgcatccgcctcctctcctctggtgcgccctcccccacctccacctccacctccacc
tccggccccgtcatctactggatgttccgcgaccaacgaatacgcgacaactgggccatc
ctccacgccgcgcaactcgccgcctcctcctcctcctcctctcccctcgccgtcgccttc
accctcttcccctcccccttcttcctctccgcccgctcccgccaactcgcattcatgctc
cggtcccttcgcctcctctctctccacctaacctccctcaacatccccttcttcctcctc
cgcggcgatcctgttctcacccttccctccctccttcgccgcctcaatgcttccgctctc
gtcgctgatttctctcctctccgcccttttcgctcctctctcgatgccatcgttcgggaa
gtcggaaatgaaatcaccgtccaccaggtcgatgcccataacgtcgttcccgtctgggcc
gcctctgaacggctcgagtacgccgcgaagaccatccgacccaagatccaccgcctcctc
ccagagtaccttgttgaattccccgacctaccgaggctttcctctccctggattggcgag
gagcctcctgggattaactgggatgagctcatctccgaggttaaaagggaagcaggggac
gtgcgggaaattgggtggtgcgagccaggggaggatgcggcaatggagatgctgatgggg
agaatggatgggtttctcacgaagaggataaagaactatgatactgaccggaatgatccg
gtgaaaccaaaggggctgtcggggctgtcgccatacctgcactttgggcaaatctcggcg
cagcgctgtgctctcgaggcaaaggcgcgtagaaaatttagtcctcagtcagtcgatgct
ttcttggaggagttgatcattaggagggagctggcagacaacttctgctattaccagcca
caatatgattcgttgcagggtgcgtgggaatgggctcggaaaactttaatggagcatgct
ttagataagagagagcatatctatacgagagagcagctggagaaagcaaaaactcatgat
cctctttggaatgcatcacaactggagatggttcattatgggaagatgcacggattcatg
cggatgtattgggcgaaaaagattctagagtggacaagtgggcctgaagaagctctttca
acagcaatatatttaaatgacaagtatgagatagatggtagagatccaaacggctatgtt
ggttgtatgtggtcgatatgtggtgtccatgatcagggctggaaagagaggccagttttc
gggaaaatacgctacatgaactatgccgggtgcaaaagaaaattcaatgttgatgcatat
atttcttatgtgaacagactagttagtggaaccaagaaaaggaaatctgaaagcctttaa
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