Typha angustifolia (narrow-leaf cattail): 140761138
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Entry
140761138 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140761138
04121 Ubiquitin system [BR:
tang04121
]
140761138
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140761138
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140761138
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140761138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
HypA
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
DUF3330
DUF1272
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
140761138
NCBI-ProteinID:
XP_072954439
LinkDB
All DBs
Position
6:7303902..7304888
Genome browser
AA seq
328 aa
AA seq
DB search
MATSSSYWCHACTRFVRVRPEDSIVCPNCDGGFLEAVDSTPLPIPTASESRHRRHRRRDR
SPFNPVIVLRRPTGSDPDPEGSAFGLYYDDGSGSGLRPLPSPMSDFLMGSGFDRLLDQLA
QIEANGFGSGVPFDRPPASKAAIESMPTVEIAAGHVSAEAHCAVCKEAFDLGAEAREMPC
KHIYHQDCILPWLSLRNSCPVCRHELPSDAARNRDGSELDGGGDEHGGGGAVGLTIWRLP
GGGFAVGRFSGGRRAGEREIPVVYTEMDGAFNAGGSPRRISWPTRGSRARERGGIGRAIH
NFFAFFSRMRHSSPITSGHASRSWRRRR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgtcttcctactggtgccacgcttgcacccgcttcgttagggttcggccc
gaagactccatcgtctgccctaactgcgacggcggcttcctcgaagccgtcgattccact
cccctccctatccccacagcctccgaatcacgccatcgccgccaccgccggcgcgaccgc
tcccccttcaacccggtcatcgtcctccgccgccccacagggtcggatcctgatccggaa
ggctccgccttcggcctctactacgacgacggatccgggtccggcctccgccctctccca
tctcccatgtcagacttcctcatgggctccggcttcgaccgcctcctcgaccaactcgcc
cagatcgaggccaacgggttcggatccggggtcccgttcgaccgcccgccggcctcgaag
gccgcgatcgagtccatgcccaccgtcgagattgctgccggccatgtcagcgccgaggcc
cactgcgctgtgtgcaaggaggccttcgacctcggggccgaggctagggagatgccctgc
aaacacatctaccaccaagattgcatcttgccgtggctctcgctccggaattcgtgcccg
gtgtgccgccacgagctgcccagcgacgcggcgcggaatagagatgggtcggaattggac
ggcggcggcgacgagcatggcggcggcggcgcggtgggcctcacgatctggaggctcccg
ggaggcgggttcgcggtggggaggttctccggcgggaggcgggcaggggagcgcgagatc
ccggttgtctacaccgagatggacggcgcattcaacgccggcggttcgccgaggaggatc
tcctggcctacaagagggagccgggcgagggagagaggcggaatcggccgagcaattcac
aatttcttcgcattcttctcccgaatgcggcattcttcgcctattaccagtggccacgca
tcgaggagttggcgccgccggcggtag
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