KEGG   Typha angustifolia (narrow-leaf cattail): 140761422
Entry
140761422         CDS       T11061                                 
Name
(RefSeq) probable methionine--tRNA ligase isoform X1
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang00450  Selenocompound metabolism
tang00970  Aminoacyl-tRNA biosynthesis
tang01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tang00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    140761422
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    140761422
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tang01007]
    140761422
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tang03016]
    140761422
Enzymes [BR:tang01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     140761422
Amino acid related enzymes [BR:tang01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   140761422
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    140761422
 Prokaryotic type
   Other AARSs
    140761422
SSDB
Motif
Pfam: tRNA-synt_1g tRNA_bind Anticodon_3 tRNA-synt_1 Anticodon_1 tRNA-synt_1e Hormone_recep CoV_peptidase DUF6664
Other DBs
NCBI-GeneID: 140761422
NCBI-ProteinID: XP_072954833
LinkDB
Position
6:join(10304764..10304884,10305011..10305155,10305767..10305920,10306035..10306190,10306280..10306510,10306634..10306777,10308703..10308793,10310125..10310231,10310309..10310423,10310740..10310858,10310991..10311056,10311150..10311278,10311403..10311543,10311632..10311752,10312479..10312708,10312784..10312885,10313142..10313372)
AA seq 800 aa
MGDSSAKKPPKLPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAI
YICGTDEYGTATETKAMEENCSPKEICDKYHSIHKEVYKWFDIGFDEFGRTSTRQQTEVC
QAIFHRLMENNWLSENTMQQLYCETCQRFLADRLVEGTCPTVGCNYESARGDQCEKCGKL
LNPTELSDPKCKVCRNTPRIRDTDHLFLELPLLSGKLEKYIIEMSVAGGWSQNAIQATNA
WLKEGLKPRCITRDLKWGVPVPHDKYKDKVFYVWFDAPIGYVSITACYTPDWEKWWKNPD
NVELYQFMGKDNVPFHTVMFPSTLLGTGESWTMMKTISVTEYLNYEAGKFSKSKGIGVFG
NDAKDTKIPSEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLSNLGNFINRVLSFIAKP
AGAGYDSIIPDAPHAESHQLTKLLAENVGKLIDQYLDAMEKVKLKQGLKTAMSISSEGNA
YLQESQFWRLFKEDPSSCAIVMKTSVGLVYLLACLLEPFMPSFSNEVMRQINVSPENLSF
CDENGEISKAKRPWDFLPAGHKIGKPEPLFKELKDEEVEFFRHKFAGSQADRLLKAETDA
RKIAEQLKTTKLSEGKTKKQSAKAVGSTKAKASEAEISISRLDIRVGLIKKVQKHPDADS
LYVEEIDVGEDSTRTVVSGLVKYIPLEEMQNRKVCVLCNLKPVGMRGIKSHAMVLAASND
DHTKVELVDPPASAVVGERVAFAGYSGEPDTVLNAKSKVWDKVQVDLHTDGELVACYKDV
PFTTSAGVCKVSSIASGAIR
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgggagactcttcggcgaagaaaccccccaagcttccaatacccggtcgccgaaacatc
ctaattacgagcgccctcccttacgtgaacaacgtcccccacctcggcaatataatcgga
tgtgttcttagcgccgatgtgttcgcgcggtactgccgacttcggggatacaatgctata
tacatttgtgggacggatgaatatgggactgccaccgaaactaaggccatggaggagaat
tgttccccaaaggagatctgtgacaaataccattctattcacaaagaggtttataagtgg
tttgacataggattcgacgagtttggtcgaacatctacccggcagcagacagaagtttgc
caagcgatttttcacagattgatggagaataattggctttcagagaacaccatgcagcag
ctatactgtgagacatgccaacggttcttagctgataggcttgtggaaggcacatgtcct
acagtgggctgtaattacgagtccgcacgaggtgatcagtgtgaaaaatgtggaaaattg
ttaaatccaactgaactcagtgatccaaagtgcaaggtatgtcgaaatactccacgcatt
cgtgatactgaccacttgtttttagagcttcccttattgagtggtaaactagaaaaatac
atcattgaaatgtctgtggctgggggttggagtcaaaatgctattcaagcaactaatgcg
tggttgaaggaaggactaaaacctcgctgtattaccagggaccttaaatggggagttcct
gttccacatgacaagtataaggataaggttttctatgtgtggtttgatgctcccattgga
tatgtctcaatcaccgcatgctacacacctgactgggaaaagtggtggaagaatcctgat
aatgtggaattatatcagtttatgggcaaggataatgttccatttcacacggttatgttt
ccttctacacttcttggaactggtgaaagttggacaatgatgaagacaataagtgttacc
gaatacttaaactatgaagcaggaaagttctcaaaaagtaaaggtattggagtctttgga
aatgatgcaaaggatacaaagatcccgtcagaagtatggcgatactacttgctcactaat
agacccgaggtatcagatacattgttcacgtgggcagatctgcaggcgaaactgaatagc
gagttgctcagtaacttgggaaattttattaatcgtgtattgagcttcattgcgaaacca
gcaggggctggatatgattcaattattccagatgctcctcatgcagaatcgcatcagtta
acaaagttgttggcagaaaatgttggtaaattgattgaccagtaccttgatgccatggaa
aaggtcaaactaaaacaaggtctgaaaactgccatgagcatttcaagtgagggaaatgca
tatttgcaagagagccaattttggaggctttttaaagaagacccatcttcatgtgccatt
gttatgaagacttcagttggacttgtgtatcttcttgcatgtttgttggaacctttcatg
ccttccttttctaatgaagtaatgaggcagattaatgtatctccagaaaatctctctttc
tgtgatgagaatggagaaatcagtaaggcaaaaagaccttgggattttctacctgctggc
cacaaaataggaaaacctgagccactatttaaggaactgaaagatgaagaagtggaattt
ttcagacataaatttgctggtagtcaagctgataggcttttgaaagcagaaactgatgcc
agaaagatcgcagagcaactgaagaccacaaagttatcagaaggaaagacgaagaaacaa
agtgctaaagcagttggtagtacaaaagcaaaggcttctgaagcagaaatttcaatctct
agactagatattcgtgtgggtctcatcaagaaagttcagaagcatccagatgcggattct
ctttatgtggaagaaattgatgtgggagaggattcaactagaactgtggttagtggcctc
gttaagtacatcccgcttgaagaaatgcagaatcgaaaagtttgtgttctctgcaatcta
aaaccagtgggtatgcgtggtattaaatcacatgcaatggttttggctgcatccaatgat
gatcataccaaggtggaattggttgatcctccggcatctgctgtggttggggagcgagta
gcttttgctggatattcaggtgagccagacactgttttaaatgccaagagcaaagtctgg
gataaggtgcaagttgacctccacacggatggagagcttgtagcatgttacaaagatgtg
ccattcacgacatcagctggtgtttgcaaggtttcatccattgctagtggggcaattagg
tag

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