Typha angustifolia (narrow-leaf cattail): 140761558
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Entry
140761558 CDS
T11061
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140761558
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140761558
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140761558
03019 Messenger RNA biogenesis [BR:
tang03019
]
140761558
03041 Spliceosome [BR:
tang03041
]
140761558
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140761558
Protein phosphatases and associated proteins [BR:
tang01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
140761558
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140761558
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140761558
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140761558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
DUF832
Motif
Other DBs
NCBI-GeneID:
140761558
NCBI-ProteinID:
XP_072955045
LinkDB
All DBs
Position
6:join(6037169..6037373,6040689..6041248,6041323..6041526,6041700..6041723)
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AA seq
330 aa
AA seq
DB search
MMMTKSSMGAMEGAVLDDIVRRLLEGGRERGKQVKLSEAEIRQLCVEAKKVFLSQPNLLE
LHAPIKICGDIHGQFVDLLRLFDLGGYPPLSTYLFLGDYVDRGKQSLETICLLLAYKIKY
PDKVFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFCDCFDCLPIAALIDDKILCMHG
GLSPDLTSLDQIRNITRPIDIPDYGLLCDLLWSDPDPDNEGWGMSDRGVSCTFGADKLVE
FLEKNELDLICRAHQVVEDGYEFFAQRRLVTIFSAPNYCGEFDNVGALLSIDEALLCSFE
ILKPMEYKSKPGSSNTLRPIPKKIPRGGNA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacgaagagctcgatgggggccatggagggcgcagtgctggacgatatcgtg
cggcggctcctcgaaggcgggagagaaagagggaagcaggtgaagctctcggaggcggag
atcaggcagctgtgcgtggaggcaaagaaggtgttcttatcgcagccgaatcttctcgag
ctgcacgccccgatcaagatctgcggtgatatacatgggcaatttgttgaccttttgagg
ttatttgatttgggtggctatcctcctctttcaacttatctatttcttggagactacgtg
gataggggcaaacaaagcttggagacaatatgtttacttctggcatataaaataaagtac
cctgacaaagtctttttgctaaggggcaaccatgaagatgccaaaataaacagagtctat
ggtttttatgatgaatgtaaacgaaggttcaatgttcgcctttggaagatattctgtgat
tgctttgattgtttacctattgcagcactcattgatgataagatattgtgcatgcatggg
ggcctttcaccagatttgactagtttagatcaaataaggaatatcacaaggcctattgat
attccagactatggtcttctttgtgatttgctttggtctgatcctgatcctgataatgaa
ggctggggaatgagtgatcgaggggtttcatgcacttttggtgctgataagcttgtagag
tttttggagaagaatgagcttgatcttatttgccgagctcatcaggtagtagaggacgga
tatgagttctttgcccaacggcgattagtgacaatattttcagctccaaattattgtgga
gaatttgacaatgttggtgctttattgagcatagatgaggccctattgtgctcatttgag
atattaaagcccatggagtacaaatctaaaccgggcagctcgaatacattgagaccaata
cctaagaagataccaagaggtggaaatgcctga
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