Typha angustifolia (narrow-leaf cattail): 140761631
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Entry
140761631 CDS
T11061
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140761631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140761631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tang04147
]
140761631
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
140761631
Exosome [BR:
tang04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140761631
Exosomal proteins of colorectal cancer cells
140761631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Med8
Motif
Other DBs
NCBI-GeneID:
140761631
NCBI-ProteinID:
XP_072955152
LinkDB
All DBs
Position
6:join(8541678..8542265,8542914..8543114,8543392..8543485,8543598..8543655,8543856..8543925,8544244..8544379,8544518..8544602,8545036..8545093)
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AA seq
429 aa
AA seq
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MAAASSSAVAHWLPSVPLTASGRPIFLPGEVERYLLPSVDLDTEENSSLPSLLSGLLVLT
SHRLVWIYNTSSSAHAIPLAAVVHAYPPKKSIRHLFATPRVRLQISLSGRSELVTFVLRG
KTDPDVFHGKLVEVMRERAWEREEEKEERSDARREAEVRMRMPVVGVSGILRKEQEMWEN
TDKSLQDAFQDLNALMGKAKEMVQLAEKMRLKLLSSSTAQTNSNDEEMGSKQDMQDWLLS
VGIASPVTKESAGALYHQQLSRQLADFVKPPLEKAGGMMSLVEVYCLFNRARGTELISPE
DLLQACALWEKFDVQVMLREFDSGVKVIQNKAHSDDEVFSRITSLAQKPDALRKGISPSD
AAFTLGIAPALAKEHLLTAESKGLLCRDVSADGFRFYINLFKEIDPDNIYSCKTPGLFHA
WISATTVSG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcctcctcctccgccgtcgcacactggcttcccagtgtccccctcaccgcc
tccggccgcccgatattcctccctggcgaggtcgagcgctatctcctcccatccgtcgac
ctcgacacggaagaaaattctagcctcccatccctcctctccggcctcctcgtcctcacc
tcgcaccgcctcgtatggatctacaatacctcctcgtccgcacacgcaatccccctagcc
gccgtcgtccacgcctaccccccgaagaaatcgatcagacacctcttcgccacgcctcgc
gttcgcctccagatttcccttagtggaagatcggagctagtgaccttcgtgctgcggggg
aagacggatccggatgtctttcatgggaagttggtggaggtgatgagggagagggcgtgg
gagagggaggaggagaaggaagagaggagtgacgcgaggagggaggcagaggtgaggatg
agaatgccggtggtcggggtgtccgggattttgaggaaggagcaggagatgtgggagaac
accgataagagtttgcaggacgcgttccaggatttaaatgccctaatgggtaaagctaag
gagatggtgcagctggctgagaaaatgaggctgaagctgttatcaagttcgactgctcag
acaaattctaatgatgaagagatgggttctaagcaggacatgcaggattggctattgagc
gttggtattgcatcaccagttacaaaagagtccgctggtgctctatatcatcaacaatta
tctcgccagctggcagattttgtcaaaccacctcttgagaaagcaggcggaatgatgtca
ctagtagaggtgtactgtctcttcaaccgtgcaagagggacagagttgatctcaccagag
gatcttttgcaagcctgtgccctttgggagaaatttgatgtacaagttatgctcagagag
tttgacagtggagtcaaggtgattcagaacaaggcacacagtgatgatgaggtcttctcg
agaattacatcccttgctcaaaagcctgatgcccttcgaaaaggaattagccccagtgat
gctgcatttacattaggaattgcaccagctttagcgaaggagcaccttctaactgccgaa
agcaaaggccttctttgcagagatgttagtgccgacggcttccggttttacattaacttg
ttcaaagaaattgatccggataatatttactcgtgtaaaactcctggactcttccatgcc
tggatctctgctacaactgtatctgggtaa
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