KEGG   Typha angustifolia (narrow-leaf cattail): 140761760
Entry
140761760         CDS       T11061                                 
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
  KO
K11661  helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140761760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tang03036]
    140761760
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Chromatin remodeling factors
   SRCAP complex
    140761760
   SWR1 complex
    140761760
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HSA ResIII DEAD Myb_DNA-bind_6 Myb_DNA-binding DBINO
Other DBs
NCBI-GeneID: 140761760
NCBI-ProteinID: XP_072955329
LinkDB
Position
1:join(2716415..2716474,2717436..2717516,2717656..2717763,2717912..2717992,2718092..2718180,2718280..2718419,2718500..2718561,2719484..2719619,2719727..2719798,2719894..2720030,2720104..2720232,2721104..2721142,2722182..2722250,2723430..2723492,2723573..2726699,2726988..2727052,2727120..2727190,2727510..2728254,2728952..2729466,2729912..2730341)
AA seq 2072 aa
MASKGPRSKLDHETRARRQKALEAPREPPRPKTHWDHVLEEMIWLSKDFESERKWKLAQA
KKVALRASKNVLDQATRGEKKLKEEEQRLKKVALNISKDVKKFWMKIEKLVLYKYQLELE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDVPYSSNPPVSPALDQSCDLNKEVNRSCLT
RSDGNLGNQLDDLETDDDYKKESEDDLEDDEHTIEEDEAQITDAERTEELSALQAEAELP
IEELLKCYTNSNDSREGSPVSGEDLAKPTAKKHQIKDSWNQVNGSKKATESPPKNVHLPA
GSSTDKEIENSNLRNLSTQPHDGTSNGNSCLGEQLPVKKSEWELSLNFLDRSDMEMSLLN
SVDEQDDKEYDDGDEEAKDDETTLSEEEEMEKREKRDPLDEIKLLQKESEIPIEELLAIY
RKDGCADGGPGESECASSSSDDQMDFKTHQDVQHGSVNFTEEDGSVEQHKPTRSSEQESG
IKDKEVNHDKMTDGRESEDIIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKHPLREYQH
IGLDWLVAMYERRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWE
TEFLKWCPAFRILTYFGNAKERKNKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYL
ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEF
KDWFSNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPQKHEHVINCRLSR
RQRNLYEDFIASSETQATLASSNFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMTGVDM
QLSSSVCTILSAGPFSEVDLRGMNFIFTQNDFDITSWEVDEIAAIAASLNVTQDTYDGEL
SCFSKNDQKRRCHGTNIFEEIQMALWEERIKQSKERAASIAWWNTLKCQKKPVYGTNLRE
LVTIKHPVSHIHDQKNNPSCHMNYSSRLADIVLSPVERFQRMLDLVESFMFAIPASRAPP
PVCWSSKVSCPVFLGPAYKETCMEVFSPLLSPIRTAIVRRQVYFPDRRLIQFDCGKLQEL
AVLLRRLKAQGHRALIFTQMTKMLDILEEFINLYGYTYMRLDGSTPPEERQTLMQRFNTN
SKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLIS
ESTIEENILKKANQKRALDDLVIQSGSYNTEFFKKLDPMELFSGHEALHVEHLNKENLVA
AECSASGLELPLSNADVELAIKYAEDEADYMALKKVEQEDAVDNQEFTEEVIGRLDDDDV
VNEDDVKPEEIVRCEEKNTEEQSCMSFVVSRDEDLTLSRGNMNEKKALTLVGGDEEMDML
ADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFLDLWYPVIDKSAMEYQVNVEEEEWEL
DRIEKFKEDLEAEIDEDQEPLLYERWDADFATTAYRQHVEALAQRQLMEELENEAQEAND
LEEENHDDIWTTSPVEHKPKQKKKQKKTKFKSLKKGSLASELEVVHEEPTKDFMTVDDVA
IDSPTHSFPRKKRKKNMGASEEENSSAKSLKKLKKPSKGNSILHSGLSAKQLKETRELKT
GDGASSLDFKPVNKDKMGGRISISYVPIKRVMVVKPEKLRKRGHAWPKDCTPDSWSLQED
ATLCAVVHEYGTNWSLVSDTLYFMSGGGIYRGIFRHPIHCCERFRELFFKYVLSSVDCPN
SDKVSSSGSGKALLKVTEDQARILLNVTSELPDNELLLQKHFVAILSSVWRAKCSFEHRQ
TMLCPQSDAHSYGLLSNSSGKKFSRLTKYMNLTNCRESSKLVMTALADAYREKQKESVFL
PSQLESRTEVTEQVDVTIEFPEEQADYDNAFPSSISVSVHVMEALQLASEPVGRFLQAES
SCRIAENRFRMASEACFEGDGSSWASSAFPTCDLTKYKSGSKSQSLGKHKPFPDTVKPPK
SKVPRTAEPHEGLALFSKAFLQSPSRTPTGLTEYFNMPHTILDSISGHSQFPPMDLLPQE
SEGMELIPYEYDPSFLAGLEELDSLVDFADIG
NT seq 6219 nt   +upstreamnt  +downstreamnt
atggcctcaaaaggtcctagatcgaagctagatcatgagaccagagctagacgtcaaaag
gctcttgaggctccaagagagcctcctcgacctaaaacccactgggatcatgttctggag
gagatgatttggctgtcgaaggactttgagtcggagagaaaatggaagttggctcaagca
aaaaaggttgctttacgagcgagtaaaaatgttttggatcaagccactaggggagagaaa
aaactgaaggaagaagaacaacgtctgaaaaaagttgccctaaatatttcgaaggatgtt
aagaaattctggatgaaaatagagaagctggttctttataagtaccaattggagcttgaa
gaaaggaaaaaaaaggctcttgataaacaacttgatttccttttaggtcaaacagaaagg
tattcaacaatgttagcagaaaatcttgtagatgtgccctattcttctaacccacccgta
agtcctgctttggatcaatcttgtgatttgaataaagaggtcaatagaagctgcctcaca
agaagtgatgggaatcttggaaaccagttagatgatctggaaactgatgatgattataag
aaagaatcagaagatgatttggaagatgatgaacatactatcgaggaggatgaagctcaa
attaccgatgcagaaaggacagaagaactgtcagctttgcaggctgaagctgaactgcca
atcgaggagcttcttaagtgctacaccaacagtaatgatagcagggaaggcagtccagta
agtggtgaagatttggccaaacctactgcaaagaaacatcagattaaggattcttggaac
caagtaaatggttctaaaaaagctactgaaagtccaccaaaaaatgttcatcttcctgca
ggcagttcgactgataaggaaattgagaacagcaacttgagaaatctttccactcagcct
catgatggcaccagcaatggcaactcctgtcttggtgaacagctgcctgttaagaaatca
gaatgggaactttcattgaattttctcgatcggtctgatatggaaatgtcgcttcttaac
tctgttgatgaacaagacgacaaagaatatgatgatggtgatgaagaagcaaaggatgat
gagactacactatctgaagaggaagagatggaaaagagagaaaaaagggaccctctagat
gagattaagttgctgcaaaaagagagtgaaatacctatagaagaacttcttgcaatatac
agaaaggatggctgcgcagatggtgggccaggcgaatctgaatgtgcttcgtccagttct
gatgatcaaatggatttcaagacacatcaggatgtccaacatggaagtgtaaacttcact
gaagaagatggatcagttgagcaacacaaacctaccaggtccagtgaacaagaatctggt
attaaagacaaggaagtgaatcatgataagatgacggatggaagagaaagtgaagatata
attgctgatgcggctgctgctgcaagatcagcacagccaaccggtaacactttctcaact
acaaaagtacgcacaaagtttcccttccttcttaagcaccctcttcgtgagtaccagcat
attggtttggattggttggttgcaatgtatgagaggagacttaatggaattcttgcagat
gaaatgggtctagggaaaacaatcatgacaattgctctgctagcacatctagcatgtgaa
aaaggaatatggggccctcatctgattgttgtaccaaccagtgttatgctcaattgggaa
actgaattccttaaatggtgccctgctttcagaattttaacatactttggaaatgcaaag
gaacggaagaataagcgacaaggttggctaaagcccaattcattccatgtgtgcataaca
acttataggcttgttatacaggattcaaaagtatttaagcggaaaaaatggaaatatctt
attctggatgaggctcatctgattaaaaactggaaatctcagcgatggcagactctacta
aatttcaactcaaagcgccggattctcttgactggaacacctttgcagaatgaccttatg
gagctctggtccctgatgcattttttaatgcctcatatatttcagtctcatcaggaattt
aaggactggttcagcaatccaatatcagggatggtggaaggccaggaaaaggtcaataaa
gaagttgtggacagactgcacaatgttcttcggcctttcatactgaggcgtttgaaaagg
gacgtggagaaacagctgccacagaagcatgaacatgtgattaattgtagactttctaga
cgccaacggaatctatatgaagattttattgctagctcagaaacacaagcaacgcttgct
agttcaaacttctttggtatgataagtattatcatgcaacttcgtaaggtatgcaaccat
ccagatctttttgaaggccgtcctattataagctcatttgacatgactggtgtagacatg
caattgagctcatcagtttgcacaatcctctctgctggtccattttctgaagttgatctg
aggggcatgaattttatatttacacaaaacgattttgacattacttcgtgggaggttgat
gagattgcagcaattgcggcttctttaaatgtcactcaagacacgtatgatggagaattg
tcttgcttcagtaagaatgatcagaagaggagatgtcatggaaccaatatatttgaagag
attcagatggccctttgggaggaaagaataaaacaatcaaaggaaagggcagcctccatt
gcatggtggaatactctaaagtgccagaaaaaacctgtctatggaacaaatctaagggag
cttgtaacaataaagcatccagtatctcatattcatgaccagaagaacaatccttcatgc
cacatgaattattcatcaagactagcagatatagttctatcaccggtagagcggtttcaa
agaatgcttgatcttgttgaatcctttatgtttgcaattcctgcttcaagagcccctcca
cctgtttgctggtctagtaaagttagttgccctgtttttttgggaccagcttataaggag
acatgcatggaagtcttcagtcctcttctatcacccattagaacagctattgtccgtcgg
caagtgtattttcctgatagacgtttgatacagtttgattgtgggaaattacaggagctt
gctgtcttgctgaggcgattgaaagcacaaggtcatagagccttgatttttactcagatg
actaagatgcttgacatattggaggagtttataaatttatatggttatacatatatgcgt
ttagatggatcaacaccgccagaagagagacaaaccttgatgcagcggttcaataccaat
tcaaaattttttctttttattttatcgactcgtagtggtggtgttgggattaacctagtt
ggggcagatacagttatcttttatgacagtgattggaatcctgcaatggaccaacaagct
caagataggtgtcacagaattgggcaaactcgagaagttcacatttataggcttattagt
gaaagtaccattgaagagaacattctcaaaaaggcaaatcagaagcgtgctcttgatgac
ttggttatacaaagtggcagttacaacacagagttcttcaagaagcttgatccaatggaa
ctcttttctgggcatgaagcacttcatgttgaacatctcaataaagagaaccttgttgct
gctgaatgctctgccagtggattggaactgcctctgtcaaatgctgatgttgagttagct
attaagtatgcagaagatgaagcagattatatggctcttaaaaaggtggagcaagaagat
gctgtggacaatcaagagttcactgaggaggtcattgggaggctagatgatgacgacgtt
gttaatgaggatgatgtgaagcctgaagagattgtgcggtgtgaagagaagaatactgaa
gaacagagctgcatgtcttttgttgttagtagggatgaggaccttaccttgtccaggggt
aatatgaatgaaaaaaaggctcttactttggttggaggagatgaagaaatggacatgctg
gctgatgttaagcagatggctgctgctgctgcagctgctggacaagcaagttcatctttt
gaaaaccagcttcgaccaattgatcgatatgcaatgcggtttttggacctttggtatcca
gttattgataagtctgcaatggaatatcaggtcaatgttgaggaagaggaatgggagttg
gatcgcattgagaaattcaaggaagatctagaagctgagattgatgaagatcaggaacca
ttgttatatgagaggtgggatgctgattttgccactacagcttaccgacaacatgttgag
gctttagctcagcgtcagttgatggaagaacttgaaaatgaagctcaggaagcaaatgat
ctagaggaggagaatcacgatgatatctggacgacgtcacctgttgaacacaaaccaaag
cagaaaaagaagcagaaaaagacaaaatttaagtctctgaagaaaggatctctagcatct
gaattggaagttgtgcatgaagaaccaacaaaggatttcatgaccgtggatgatgtcgcc
attgattcccctactcattcgtttcctaggaaaaaacgtaagaagaatatgggtgcatcc
gaggaagaaaacagctctgcaaaaagcttgaagaaactcaagaaaccttctaagggtaac
tctatcttacattctggcttgtcagctaagcaacttaaggaaactagggaattaaagact
ggagatggagctagcagtctcgattttaagccagtaaacaaagacaagatgggaggtaga
atttccatctcatatgtgccaataaaacgtgtcatggtggtcaagccagaaaaattaaga
aagaggggtcatgcttggccgaaagattgcactccagattcttggtcactccaggaagat
gccacattatgcgccgttgtacatgagtatggcaccaattggagccttgtaagcgacact
ctttattttatgtcaggtggtggcatttacagagggatattccgccatccgatccattgt
tgtgagaggtttagagaattgttctttaagtatgttctctcatcagtggactgtcccaac
tcagataaagtttcctcttctggatctggaaaggctctcttaaaagtaactgaggaccaa
gctcggattttactcaatgtgacgagtgagctgcctgataacgagttgcttctccaaaaa
cattttgttgctatactttcttcggtatggcgagcaaaatgttcctttgaacatcgtcaa
accatgctatgtccacaaagtgatgcccattcatatggacttctttcaaattcatctggg
aagaagttcagcagactaactaaatacatgaacttaaccaattgtagagaaagtagtaag
ctagtaatgacagccctggccgatgcttatagggaaaagcagaaagaatcagtatttctg
cccagtcagctggagtctcgtactgaagtaactgaacaggtggatgtaacaatagagttc
cctgaggaacaagcagactacgacaatgcctttccgtcttccattagtgtttctgtacat
gtcatggaagcacttcaactagccagtgaacctgttggacgttttttgcaagcagaatct
tcttgcagaattgctgagaatcggttcaggatggcttcagaagcttgctttgaaggtgat
ggatcttcttgggcatcttcagcttttccgacttgtgatctcactaaatataaatctggt
tcaaagtctcagtctttgggcaagcacaagccatttccagatacagtcaaacctccaaaa
tccaaagttccacggactgctgaaccacatgaaggtttagctttatttagtaaagctttt
ctgcaatccccaagtcgaactcctacaggtctcacagagtatttcaatatgcctcacacc
atattggactctataagtgggcattctcagttccctcctatggacttgcttcctcaagag
tctgaagggatggagcttattccatatgagtatgaccccagttttcttgccggccttgag
gaactggattcattggtggattttgcagatattggataa

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