Typha angustifolia (narrow-leaf cattail): 140761801
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Entry
140761801 CDS
T11061
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140761801
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140761801
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140761801
NCBI-ProteinID:
XP_072955400
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All DBs
Position
6:complement(join(9441547..9441784,9442892..9443097,9443174..9443919,9445165..9445310,9445390..9445520))
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AA seq
488 aa
AA seq
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MPSFLHSTCILILFFLLPFLASSSPLPNSTDLPDPDAVVRHVQRRLDLALRSKDSQPSSS
CLTGNPIDDCWMCSGSDWRSDRQRLADCAIGFGRNALGGKGGPIYVVTDSSDLDAVNPKP
GTLRHAVIQEGPLWIVFSADMAIHLAEELVVNSYKTLDGRGANVHVAGGACITLQSVSHV
IIHNIHVHHCVPAGNANVASSPTQYGWRSKSDGDGISLYGARDVWVDHCALSYCTDGLID
AIMGSTAITVSNSYFSHHNEVMLLGHNDDYVADSAMQVTIAFNRFGEGLVQRMPRCRHGY
FHIVNNDYRQWEMYAIGGSANPTINSQGNRYIAPSDPNAREVTKRVDTDESVWAGWNWRT
EGDLMVNGAFFVPSGEALEVKYEKASSLEPKSASFVDLLTQNAGVLGGPRDNGDGTVPGV
TYGGSGMTAVGGGSGGDGNSNGGGLGFGGLGMVFGSHADLPPLQCCSVLILSTSLIVTVF
SLLCLHPL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccttccttcctccattccacctgcattcttatcctcttcttccttctccccttcctc
gcctcctcttccccacttcccaactccaccgacctcccggaccccgacgccgtcgtccgc
cacgtccaaaggcgattagacttggcattgcgctctaaggactcgcaaccttcttcctcc
tgcctcaccggtaaccccatcgacgactgctggatgtgctccggctccgactggcggtcc
gaccggcaacgcctagctgactgcgccatcggctttgggcgaaatgccctcggtggcaaa
ggtgggcccatctacgtcgtcacggactcctccgaccttgacgccgtcaacccgaagccg
gggaccctccgccacgccgtcatccaggagggcccgctctggatcgtcttctcagctgac
atggccatccacctggcggaggagctcgtcgtcaacagctacaaaaccctcgacggccgc
ggggccaacgtccacgtggccggcggcgcctgcatcacgttgcagtccgtctcccacgtc
atcatccacaacatccacgtgcaccactgcgtcccggccggcaacgccaacgtggcgtcg
tccccgacccaatacggctggcggtctaagtcggacggcgacggcatctccctctacggc
gcgcgcgacgtgtgggtggaccactgcgccctctcctactgcacggacggcctcatcgac
gccatcatggggtcgacggcgatcaccgtgtccaacagctacttctcgcaccacaacgag
gtgatgctgctcggccacaacgacgactacgtggccgactcggcgatgcaggtcacgatc
gcgttcaaccgattcggagaagggttggtgcagaggatgccgaggtgccgccatgggtat
ttccacatagttaacaacgattacaggcagtgggagatgtacgccattggtgggagtgct
aatcccaccattaatagccaggggaatcgatacattgccccatccgacccaaatgccaga
gaagtgacgaagagggtggatacggatgagagcgtgtgggcaggatggaattggagaaca
gagggagatttgatggtaaacggagccttcttcgtgccttcaggagaagcgttggaggtc
aagtacgagaaggcctccagcttggaacccaaatccgcttcattcgtcgacctgctcaca
caaaacgccggcgtcctcggcggacccagggataacggcgatggaaccgtccccggggtc
acctacggtggatcaggcatgaccgctgtcggcggcggcagtggcggcgatggtaatagc
aatggaggagggttgggatttggaggccttggtatggtgttcggaagccatgcagatctg
ccgcctttgcaatgctgctctgttttgattttgtctacctctttaattgttactgtcttc
tcactactatgcttgcatcccttgtag
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