Typha angustifolia (narrow-leaf cattail): 140761976
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Entry
140761976 CDS
T11061
Name
(RefSeq) nuclear transport factor 2 isoform X1
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140761976
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
140761976
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
140761976
NCBI-ProteinID:
XP_072955654
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All DBs
Position
1:complement(join(9649643..9649911,9650200..9650266,9653864..9653929,9654031..9654152,9654241..9654415,9655312..9655553,9655661..9655952,9656077..9656214,9656320..9656370))
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AA seq
473 aa
AA seq
DB search
MADQQQNSAASPPSAQVVGNAFVHQYYHILHQSPELVYRFYQESSKLGRPEEHGGMSSLT
TLEAINEKILSMDFVRAEIKTVGAQESLGGGVIVLVTGHLTGKDNVKRDFTQSFFLAPQD
KGYFVLNDMFRYIGEDEQDDHQGGDENLANGTGAPLLPEQDSPPEQEQLGLENAVPELEE
EEANEEEVYNPSDNEERSVVEEETQVADVIDEAPSLTHAVVADSSAPASHEEAPKKSYAS
IVKDMKDNAGPLIVPTHPARPVHVKPERQAVPAPTPAPANDIPASLSSTAEVGNVQEPEA
DGHSIYVKNLPLNAIPAQLEEEFKRFGTIKPDGIQVRSHKLQGFCFGFVEFEEASAVQSA
IEASPIMIGGRQAYVEEKRTTGSRVSNRGRFVPGRGSGFRNDGMRGGRGYYGGGRGYGRG
EFHSRPDFGNRGGGRGGSSNRGGDVGYQRVDHTATAGGRGNRPAPLAANADPK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagcagcagaactcggccgcgtcgcctccctccgcccaagtggttgggaat
gcgttcgttcaccagtactatcatatacttcaccagtcgccggagttggtgtaccggttc
taccaggagagcagcaagctcggccgcccggaggagcatggtggaatgagctcgctcacc
actttggaggcgatcaatgagaagatactgtccatggactttgttagagcggagataaag
acggttggcgcccaagagtcacttggtggtggggtaattgtcctggtgacggggcacctc
actgggaaggacaatgtcaagagggatttcacccagtctttcttcctggctccccaagac
aaaggctactttgtcctcaatgacatgttccgatatatcggggaggatgagcaggatgat
caccaagggggggacgagaacttggcaaatggcactggtgcgcctctgttaccggagcag
gattcccctcctgaacaggagcagcttggtctggaaaatgcagtgccagaactggaagag
gaggaagcgaatgaggaggaagtttataatccatcagacaatgaagagaggtcagtcgtg
gaggaggaaacacaggttgctgatgtcatagatgaagctccaagccttactcatgcagtt
gtggctgactcaagtgctccagcatcccatgaggaggcgccaaaaaaatcatatgcttcc
attgtgaaagacatgaaggacaatgctggcccattaatagttccaacacatcctgctagg
ccagtgcatgttaagccagaaagacaggcagtccctgctccgactccagctccagccaat
gatattcctgcttcactttctagtactgctgaggtcggtaatgttcaagagccagaagct
gatggacattctatttatgtaaaaaatctgcctctaaatgccattcctgcacaacttgag
gaggaattcaagaggtttggaaccatcaagcctgatggtattcaagtcagaagccataag
cttcaagggttctgttttggatttgtggagtttgaggaggctagtgctgtccagagtgca
atagaggcttctcctataatgatcggtggtcgtcaagcttatgtcgaggaaaagaggacc
actggttcacgagttagcaacagaggaaggttcgtaccaggtagagggagtggcttccgg
aatgatggcatgagaggaggacgtggttactatggtggtgggaggggttatggtaggggg
gagttccatagcagaccagattttggaaacagaggtggtggtaggggtggctcttcgaac
cgtggaggggatgtaggttatcagagggttgatcacacagcaaccgctggtggtcgtggt
aatcgacctgcaccattggctgccaatgcggatcctaaatag
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