KEGG   Typha angustifolia (narrow-leaf cattail): 140762002
Entry
140762002         CDS       T11061                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 2 isoform X1
  KO
K10899  ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140762002
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     140762002
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     140762002
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind HRDC RQC ResIII MscS_porin DUF4349
Other DBs
NCBI-GeneID: 140762002
NCBI-ProteinID: XP_072955689
LinkDB
Position
7:complement(join(18410879..18411076,18411160..18411380,18412144..18412222,18413521..18413603,18414571..18414678,18415612..18415665,18415747..18415813,18415905..18415970,18416043..18416129,18416191..18416243,18417066..18417099,18417233..18417269,18417701..18417789,18418660..18418782,18418866..18418970,18419075..18419179,18419450..18419665,18419749..18419895,18420012..18420232,18421092..18421152))
AA seq 717 aa
MEADIEEELLCVEAELQDVQDQIKALLDRQEKLYERQSELKTLLDEVKSSEETGNTTAPV
AAEDWSGSFEWDSHADDIRFNVFGIPSYRANQREIINAVISGRDVLVIMAAGGGKSLCYQ
LPAMLHDGVALVVSPLLSLIQDQVMGLSALGIPAHMLTSTTSKEDEKFIYKALDKGEGAL
KMLYVTPEKISKSKRFMSKVEKCHHGGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKIQ
FPNVPVIALTATATYKVQTDLMEMLHIPKCVKFVTTVNRPNLFYKVHEKPSVGKFVIDEI
ADFIRGSYSNNESGIVYCFSRKECQQVAKELCERGISADYYHADMEVVARGKVHMLWSKN
KLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQTCQESGRAGRDGLPSECVLYYRP
GDVPRQSSMVFYENCGLQNLYDIVRYCQLKRNCRRSAFFQHFGETMQDCNGMCDNCAYGS
EIREVDATYHAKIIVSLLRDMQLNDQKATLLQLVDRFKSKIKEVGASNPPVSDLKKEELE
KLIIQLILDRVLKEEFQHTAYSTNAYVALGPLWKLAIQGKKAVMLEINIAPPGNNTRSPK
IAKRSHQSALETKLDELRKELSSSHGGIFPHAVLSMQQISMLGTQKPTSIEELEKLIGKV
KAEKYGCRIIQLIQHYIMSEQPDVSMQSAAKATENGSNKRQKKNKAIVLVESSEDEE
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggaggccgatatcgaggaagagctcctctgcgtcgaagccgagctccaagacgtccaa
gaccaaataaaagcactacttgatcgccaagaaaagctgtatgagagacaatctgaactg
aagacattattggatgaagttaaatcatctgaagaaacagggaatactactgctccggtt
gctgcagaagattggtctgggagttttgagtgggattctcatgctgatgatattagattc
aatgtttttggtataccttcctatcgagcaaatcagagagaaattataaatgctgttatt
agcggaagagacgttttggttataatggctgcaggtggtggcaagagcttatgctaccaa
cttccagccatgcttcacgatggagttgccctggttgtcagtcctttgctttctcttatt
caggatcaggtcatggggctgtctgctttaggtattccagcacatatgttgacttcaact
actagtaaggaagatgaaaaatttatttacaaggcccttgataaaggtgaaggagcactt
aaaatgttatatgtaactcctgaaaagatatcaaaaagcaagaggtttatgtctaaagtt
gaaaagtgccaccatggtgggcgtctctcccttattgcaattgatgaggcacactgttgt
agtcaatgggggcatgattttcgtcctgactataagaatctgggtattttgaaaattcaa
tttcctaatgttcctgtaatagccttaacggcaactgctacttataaagtccaaacagat
ctgatggagatgcttcatattcccaaatgtgtcaagtttgttactacagttaacagacct
aatctgttctacaaagtacatgagaagccatcagttggaaaatttgttattgatgaaatt
gcagactttattcgtggatcgtactcaaataatgaatctgggattgtctactgtttttcc
aggaaggagtgccagcaggttgcaaaggaattatgcgaacgtggaatttcagcagattat
tatcatgccgatatggaggtagttgctcgtgggaaagttcatatgctctggagcaaaaac
aaattgcaggtcattgttggtacggtagccttcggtatgggcatcaacaagccagatgtt
aggtttgtgattcatcatagccttagcaagtcaatggagacatactatcagacatgtcag
gagagtggtagagctggaagagatggacttccttcagaatgtgttttatattatagacca
ggtgatgttccacgtcagagttcaatggtcttctatgagaattgtggcttgcaaaatcta
tatgatatagtgcgatactgtcagttaaaaagaaactgccgtcgaagtgctttctttcag
cattttggggagactatgcaggattgtaatgggatgtgtgacaactgtgcttatggatct
gagataagggaagttgatgcaacttaccatgcaaaaattattgtctcattgttacgtgac
atgcaattgaatgatcaaaaagcaacgttgttacaactagtcgacagattcaaatcaaaa
attaaggaagtaggtgcttcaaatcccccagtttctgatcttaagaaagaggaacttgag
aagctgataattcagcttatattagaccgtgttttgaaagaagaatttcaacatacagct
tattctaccaatgcatatgttgctctaggaccgttatggaagctagcaatacaagggaag
aaagcagttatgcttgagattaacattgctccgcccggtaacaacactaggagtcctaag
atcgccaagcgcagccaccaatctgcactggaaactaaacttgatgagctacggaaagaa
ctctcttccagccatggtggaatattccctcacgctgttttatcaatgcaacagattagc
atgttaggcacccaaaaaccaacctccattgaagagctagagaagcttattgggaaagtg
aaggctgagaagtatggctgcagaattattcagctaattcagcattacatcatgtcggag
cagcctgatgttagtatgcagtccgcagccaaagctactgaaaatggtagtaataagagg
cagaaaaagaataaagctattgttcttgttgaaagcagtgaagatgaagaatag

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