Typha angustifolia (narrow-leaf cattail): 140762045
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Entry
140762045 CDS
T11061
Name
(RefSeq) eukaryotic translation initiation factor 4B1-like
KO
K03258
translation initiation factor 4B
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140762045
03012 Translation factors [BR:
tang03012
]
140762045
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140762045
mRNA cycle factors
Stress granule specific factors
140762045
Translation factors [BR:
tang03012
]
Eukaryotic type
Initiation factors
eIF-4
140762045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-4B
Motif
Other DBs
NCBI-GeneID:
140762045
NCBI-ProteinID:
XP_072955752
LinkDB
All DBs
Position
1:complement(join(5879331..5879355,5881060..5881473,5883157..5884307))
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AA seq
529 aa
AA seq
DB search
MSKPWGGVGAWALEAERAEAEEREAAAAAAAAATSTAADISQSFPSLKEAAAAVGKPKKK
KATPLSLAEFGSYVGPAGGRRNPSVEPRGLTHDEILLLPTGPRERSAEELDRSRLGGGFR
SYGYNSRRTEESEGSGSRRQYGAGFDDEQRRGTSARVSDLDQPSRADEVDNWAANKKSFA
PIDSGKGDRYGSMRSNSSSRVDDVDDWSRGKKPIASRHDSFGSGFRDSSGPSDSDRWFRG
GSGGVRPQSEERERPRLVLEPPKGDVRVPSESVSTRPSPFGAARPREEVLAEKGLDWRKM
DTAIEVKKTSRPTSSHSSRPSSAQSSRPGSPAVQVLAAAGEGASRTRPKVNPFGDAKPRE
VVLEEKGKDWRKIDLDLEHRGVDRAETAEERMIKEHINHLKKALEEAETKMSDGSAQVST
GITNLREQIFDKEKELELLTTELDDKVRFGQRTTDVRPGSGAGRVTMFSQSDVSEESQST
ESMGRPHSRGGILDMRAKPVDDKWGFQGVRDRGSFGGRNSDRSRSRERW
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccatggggcggagtcggcgcgtgggccctcgaggctgagcgcgccgaggcc
gaggagcgcgaggcggctgcggcggcggcggcggccgccacgagtaccgccgctgatatt
tcccagagcttccccagcctcaaggaggccgccgccgcagtcggaaaacctaagaagaag
aaggctacccccttatcccttgccgagttcggctcatacgtcggccccgctgggggccgg
cggaacccctccgtggagcccaggggcctcacccatgatgaaattctcctcctcccaact
ggtccccgcgagagatctgcagaggagctcgaccgctcccgccttggtggcggcttccga
tcgtatggctacaactcccggaggaccgaagaaagcgagggttcaggttcaaggaggcag
tatggtgctggattcgatgatgagcagcggcgcggcacatcggctagggtttctgatctc
gatcagccatcacgggcggacgaggtggataattgggctgcgaacaagaagtcttttgcg
ccgatagattccgggaagggagatcggtatggttcaatgaggagcaacagcagctcgagg
gtggatgatgtcgatgactggtcccgtgggaagaagccgattgcttccaggcacgacagc
tttgggtcgggatttagggattcttctggtccatcagattccgaccgttggtttagggga
ggcagcggaggagtgaggccccaaagtgaggagcgagaaaggccgagacttgttcttgaa
ccaccgaagggggatgttagggttccgagtgagagtgtgagcactcggccaagcccattt
ggtgctgcgaggcctagggaggaagttttggctgagaaaggattggattggaggaaaatg
gatactgctattgaggtgaagaagaccagcaggccgactagttctcattctagtaggccg
tctagtgctcagtcaagcaggcctggcagccctgcggttcaagttctggcagctgcagga
gaaggagcttcgaggacacggccaaaagtgaaccctttcggtgatgcaaagcctcgcgag
gttgtgttagaggagaaaggaaaggattggagaaagatagacctagacctagaacatcgt
ggggttgacagagctgagactgctgaagaaaggatgattaaagagcatataaatcatctg
aagaaggcattggaagaagctgagacaaaaatgagcgatggttctgcacaagtttctaca
ggaataacaaacctacgagagcagatatttgataaagagaaggagctggagctgttgaca
actgagttggatgacaaggttcgatttggacagagaaccactgatgttaggcctggctca
ggagcaggaagggttactatgttttcacaatctgatgtatcagaagagtcacagagtaca
gagtccatgggaagacctcattcccgtggtggcatattagacatgcgggccaagccagtt
gatgataaatggggatttcagggagttcgagataggggctcttttggaggcagaaattca
gacaggtcaaggtccagggagagatggtga
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