Typha angustifolia (narrow-leaf cattail): 140762291
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Entry
140762291 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K12817
pre-mRNA-splicing factor 18
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140762291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140762291
Spliceosome [BR:
tang03041
]
Complex C
Other components
Step II factors
140762291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
140762291
NCBI-ProteinID:
XP_072956104
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Position
7:complement(join(1965413..1965820,1967256..1968128))
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AA seq
426 aa
AA seq
DB search
MDLLKRELQRKRQSLEADFGGKKLLRRSEIEQKNLQKLREEEHRRHLSKSQSSSSSPSPT
PPSSSSNPNTNISNPNNADPSLPPALSSLSSKKPPEILSDEQRIDDLVLPRHEVIRRFRL
LKQPITLFGEDDAARLDRLKNILKSGVIEVDSDMTEGQTNDFLRDISELRKRHKSGSSSS
TFLKAGKRDDGGDALEDGGGDGDGDKNLSGDGGSSGVDADKDLKRMKAKFEELCDEDKIL
VFFKRLLYEWKQELDEMPEAERRTAKGKSMVATFKQCARYLKPLFKFCRKKVLPDDIRQA
LLVVVQCCMKRDYLAAMDLYIKMAIGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDE
TTRKYLQSVKRLMTLCQRRYPALPSKSVEFNSLANGSDLQSLLTEERDSVRASPEDRLRL
MPAPKE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctcaagcgcgagctccagaggaagcgtcaaagccttgaagccgacttcggc
ggcaagaagctcctccgccgctccgagatcgagcaaaagaacctccaaaagctccgcgag
gaagagcaccgccgccacctctccaagtcccagtcctcctcctcctccccttctcctact
cctccctcttcctcctcgaaccctaatactaatatctctaaccctaataacgccgacccc
tctctacctcccgctctctcctccctctcctcgaagaaaccccctgagatcctctcggac
gagcagcgaatcgatgacctcgtcctcccccggcatgaggtcatccgccgcttccgcctc
ctcaagcagcccatcaccctctttggggaggacgatgccgcccgccttgatcgcctcaag
aacatcctcaagtccggggtcatcgaggtcgacagcgacatgacggagggacagactaac
gatttcctccgcgacatctccgagctccgcaagcgccacaagtccggttcctcttcctcg
acgttcctcaaggccggcaagagggatgacggcggcgatgcgctggaggacggcggggga
gatggggacggcgacaagaatttgagcggggatgggggttcgtcgggggtggatgcggat
aaggacttgaagcggatgaaggccaaattcgaggagctttgcgatgaggataagatattg
gtgttctttaagaggttgctgtatgagtggaaacaagagctcgatgagatgcccgaggcg
gagaggaggacggccaaggggaaatccatggttgccacttttaagcagtgtgcacggtat
ttgaaacctctattcaaattctgcaggaaaaaggttcttccggatgacatccggcaggca
ttgctcgtcgtggtccaatgctgtatgaagcgggactatttagcagccatggacctgtac
attaagatggccatcggcaatgcaccttggcctattggtgttaccatggttggcatccac
gagcgttcggctcgagagaagatccacacaaacagcgtagcccacatcatgaatgatgag
acgacccgcaagtacctgcagtctgtgaagaggcttatgaccctttgccaacgccgctac
ccagcacttccatccaaatcagttgagttcaacagcttggcaaatggaagcgatttgcag
tcactattaactgaggagagagattctgtgagagcttcgcctgaggatagacttcggtta
atgccagcgccaaaggaataa
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