Typha angustifolia (narrow-leaf cattail): 140762314
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Entry
140762314 CDS
T11061
Name
(RefSeq) protein CDC73 homolog
KO
K15175
parafibromin
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140762314
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
140762314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
CDC73_N
PcfJ
CR_prot_dom_plant
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
140762314
NCBI-ProteinID:
XP_072956145
LinkDB
All DBs
Position
7:complement(join(2993641..2993730,2993827..2993909,2994217..2995228))
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AA seq
394 aa
AA seq
DB search
MDPLSVLRDFATRGDLASVVQVGDEFRFGADYSFPCSAGTAYRSKLGGHYSLETLVFFLL
HHHLKHTDYLQATRLRRIPTVTLPDRKPLLDYLLGRTSSADAIDLLPPPPPPPPSDEYVP
GEPAGDEAAAGATVPAAVDYVAMIRALERPLKDRESLLESRNRDFHAVLIASTKREEERQ
RIESQQRKDGLVAKTRLIGSDDHHRGGGGGGGGIDDASDLAPKTKMLRKIGEGVPIILVP
SASQTLITIYNVKEFLEDGVFVPTDVKMKAMRGVRPECVTVQKKLSRDRAVAAYEVRDKP
STLKADDWDRVVAVFVLGKEWQFKEWPFKDHVEIFNKIIGFFMRFEDDSVESAKIVKQWN
VKIISISKNKRHQDRAAALEVWDRLEEFMRSRSH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatcccctctccgtcctccgcgacttcgccacccgcggcgacctcgccagcgtcgtc
caagttggcgacgagttccgctttggcgccgactactctttcccctgctccgctgggaca
gcctaccggtccaagctcggcgggcactattccctcgaaaccctagtcttcttcctcctc
catcaccacctcaagcacaccgattacctccaagccactcgcctccgccgcatacccacc
gtaaccctacccgaccgcaagcccctcctcgactacctcctcggccgcacctcgtccgcc
gatgccatcgacctcctccctcctcctcctccccctcccccctccgatgagtacgtcccc
ggcgaacccgccggggacgaagccgccgcaggcgcaacggttccggctgcggtcgactac
gttgccatgatccgtgctcttgaaagacctctcaaggaccgcgaatccctcctcgaatcc
cgcaatcgcgacttccatgccgtcctcatcgcctccacgaagcgcgaggaggagcggcaa
aggatcgaatcgcagcagcgcaaggacgggctcgtcgccaagactcgcctgatcggctcc
gacgaccaccaccgcggcggaggaggtggtggaggaggcatcgacgatgcgtcggatctc
gcgccgaagaccaagatgcttaggaagatcggtgagggggtgccgatcattttagttccg
agcgcgtcgcagacgttgattacgatttataatgtgaaggagtttttggaagatggagtg
tttgttcccacggatgtgaagatgaaggcgatgcggggcgtacggccggagtgcgtgacg
gtgcagaagaagctgagcagggaccgagcggtggcggcgtatgaggtgagggataagccg
tcgacgctaaaggcagatgattgggatagagtagtcgcagtgtttgttcttgggaaggaa
tggcagttcaaggagtggcctttcaaggaccatgttgagatcttcaacaagatcattgga
ttttttatgcgttttgaggacgatagcgtggaatctgcaaagatcgttaaacagtggaat
gtgaagattatctcaattagcaaaaacaaaaggcatcaagacagagctgcggcacttgag
gtgtgggatcggcttgaagagttcatgcggtcacgttcacattga
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